Gene Sfum_2065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2065 
Symbol 
ID4459645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2528131 
End bp2528574 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content62% 
IMG OID639702832 
ProductPTS system fructose subfamily IIA component 
Protein accessionYP_846183 
Protein GI116749496 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCCA ACAACCAGAA CGAACTCATC GGGATCGTGG CGGTTTCGCA CTGCCGGCTG 
GCACGGGAGA TGCTCGACGT GGCCGAGCTG ATCGTCGGTC CCATGCCGGC CTGCAAGGCC
ATCTGCTTCG GGACGGATCA GCCGGTCGAG GAGATGACCC GGATGCTGCG CGAGACCATC
AGGGAAGTGG ACCGGGGGAA AGGGGTCCTG ATCCTGACCG ATCTTTTCGG GGGCACTCCG
GCGAACATCA GTCTCTCGTT CCTGGGGCCG AAGGTGGAAG TCGTGTGCGG AATGAATCTT
CCGATGCTGA TCAAGCTGGC CGGATGCCGG AAGGATCATA CTCTCAACGA AGCCGCGGCG
CTCGTCAAGG AATACGGGCA GCGCCACATT TCCCTGGCCA GCGAGGTGCT GTCCCGGTCC
GCGAAATCGA CCGGAACGGG ATAG
 
Protein sequence
MASNNQNELI GIVAVSHCRL AREMLDVAEL IVGPMPACKA ICFGTDQPVE EMTRMLRETI 
REVDRGKGVL ILTDLFGGTP ANISLSFLGP KVEVVCGMNL PMLIKLAGCR KDHTLNEAAA
LVKEYGQRHI SLASEVLSRS AKSTGTG