Gene Sfum_2055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2055 
Symbol 
ID4459634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2513467 
End bp2514069 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content57% 
IMG OID639702821 
Producthypothetical protein 
Protein accessionYP_846173 
Protein GI116749486 
COG category[K] Transcription 
COG ID[COG5340] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCGA CAACGACGGA ACAAGTTCTT GACCTTGTGG AGAAAGCAGG GGTCTTCCGT 
CCAAGGGAGC TCGATTCTTA CGGTATTCCA CGCGAATACC TCGTACGACT CTGTCGCAAG
GGACTGGTGC GGCGCGTTGC GCGCGGGCTT TATACTTTCG TGGATTCCGA TGTGAGCGAG
CACCTTAGCC TGGCAGAAGC ATCCAAGAAA ATCCCTCATG GTGTCATCTG CCTACTGTCC
GCACTTCGGT TCTACGGGCT GACGACGCAA GCCCCTTTTG AAGTCTGGGT CGCTGTCGAC
GTCAAGGCAA GGAAGCCCAG GAGCGATGGT CTGCCACTCC GCATCGTGCG CTTCTCTGGC
GCTGCACTCC GTTCCGGCGT TGAGGACCAG CTCATTCAGG GTGTCAAAGT AAGGGTTTAC
AGCCCCGCGA AAACCGTTGC GGACTGTTTT AAGTACCGTA ATAAGACCGG CCTTGACGTG
GCTCTGGAAG CCCTGCGCGA GTGCTGGCGC GAGCGCCGCT GTACCATGGA CGACCTTTGG
CGCTACGCTA AGATATGCCG TGTTTCCAAT GTGATGAGAC CCTACCTGGA GTCACTGCCG
TGA
 
Protein sequence
MAPTTTEQVL DLVEKAGVFR PRELDSYGIP REYLVRLCRK GLVRRVARGL YTFVDSDVSE 
HLSLAEASKK IPHGVICLLS ALRFYGLTTQ APFEVWVAVD VKARKPRSDG LPLRIVRFSG
AALRSGVEDQ LIQGVKVRVY SPAKTVADCF KYRNKTGLDV ALEALRECWR ERRCTMDDLW
RYAKICRVSN VMRPYLESLP