| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2044 |
|---|
| Symbol | |
|---|
| ID | 4459623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 2502199 |
|---|
| End bp | 2502630 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639702810 |
|---|
| Product | LysM domain/BON superfamily protein |
|---|
| Protein accession | YP_846162 |
|---|
| Protein GI | 116749475 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACTTT TCGATTTTGT CAAGGAGATT GGGAAAAAGC TTTTCAGCGG TGAGGCGGAA
GCTGCGGACA AGATCAAGAA CCATATTGAA GAGGCAAACC CCGGGATCCA GGGACTGAAT
GTTTCCTTTG AAGACGGGGT GGTCTCTCTT TCCGGGCAGG CATCGAGCCT CGAGGCCCTG
GAGAAGGCCG TCCTGATGGC CGGTAACGTG CAAGGCGTAT CGGAGGTCAG GGTCCAAGGC
CTCCAGGCCC CACCCGCGGA GGCCAAGGTG GAATACTACG TTATCAAAAA AGGGGATACG
CTTTCGGCCA TCGCCAAACA GTTTCTGGGG AATGCCAATG ACTATCCGAA AATCTTCGAA
GCCAACCGTG AGGTCATCCG CGATCCGAAC CTCATCTTCG TCGGCCAGAA AATCCGCATT
CCTCTGAAGT GA
|
|---|
| Protein sequence | MGLFDFVKEI GKKLFSGEAE AADKIKNHIE EANPGIQGLN VSFEDGVVSL SGQASSLEAL
EKAVLMAGNV QGVSEVRVQG LQAPPAEAKV EYYVIKKGDT LSAIAKQFLG NANDYPKIFE
ANREVIRDPN LIFVGQKIRI PLK
|
|---|
| |