Gene Sfum_2028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2028 
Symbol 
ID4459659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2484856 
End bp2486049 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content60% 
IMG OID639702794 
Producttransposase, IS4 family protein 
Protein accessionYP_846146 
Protein GI116749459 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGGG CACTTTCCGA CCGTCGCGAT CAGGCCAAAG TGCACCATGG CCAGGAGGAA 
CTCTTGCGCC AACGCCTTTT CGCCATTGCG ATGGGCTACG AAGACGGCAA CGATCATCAA
TCCCTGCGCT TTGATCCGGG GCTCAAAACC GCCGTTGGCA GGTTGCCCGA AACCGATCCG
GCACTGGCTT CCCAACCGAC GCTCTCACGT TTCGAAAACC GTGTAGGGAA CTGTGAGCTT
CGCCGCCTGA GCGACGCCCT GATTGACGCC TATGTGGCCG CACACCCGGC TCCGCGCAAG
GTAATCGTGC TCGATATGGA CGCAACGGAT GATCCCGTTC ACGGCTTGCA GCAACTCTCC
TTCTTCCACG GCTACTACGA TCAGTACATG CTGCATCCGC TGCTGATCTT TGACGGGCTC
ACCGGTTTTC CGGTAGCCGC GGTGCTGCGC GCGGGCAACG CACACGCGTC CAAAGGAGCG
GCGGCAATCT TGAAGCGCAT CATCCGCCGC CTCAAACATG CCTATCCGGG CGCCACTATT
CTGGTGCGCG CCGATGCAGG CTTTGCCGTA CCGGCCATCT ACAGGCTCCT TGAGCGCGAG
AAGGTCAAAT ACACGATCGG CCTGATCACC AATGACCGTC TTCGCAAACG TGCCGCCAAC
CTGGTGATCA AAGCCGAGAG GCAGTTCGCC AAAACCGGAG CGAAGCAAAG ACTCTTTGGC
AGCTTTTACC ATCGAGCCGG ATCCTGGCAA CGATCACGTC GGGTTATTGC CAAGGTCGAG
CGACTCTCCC GGGGCCTCAA CACCCGCTTT GTGGTGACCA ACATCCTTGA ATCCGCCGCA
GGGATTTATG ACGGCATCTA CACCGGCCGG GGCGATGCCG AGAACCGGAT CAAGGAGCTC
AAGGTTCATC TCAAAGCCGA TCGGCTGAGC TGCACCCGGT TCCAGGCCAA CCAGTTTCGG
CTGCTGCTGC ACACCTTCGC CTTCGTTCTG TTTTGGCACC TGCGCCGGAG CCTTGCCGGA
ACGGAACTGG CTGCCGCCAC AGTCGACACC CTCAAGCTCA AACTGCTCAA AGTCGGCGCA
CGGGTGGTCC AGAGCGTGCG GCGCATCCTC TTTACCATGC CGCGCGCCTA TCCCTATCAA
CGCCTCTTTG CCACCGCACT GCAAAATATT CGGCAAATGC CGCTCCGATG CTGA
 
Protein sequence
MSRALSDRRD QAKVHHGQEE LLRQRLFAIA MGYEDGNDHQ SLRFDPGLKT AVGRLPETDP 
ALASQPTLSR FENRVGNCEL RRLSDALIDA YVAAHPAPRK VIVLDMDATD DPVHGLQQLS
FFHGYYDQYM LHPLLIFDGL TGFPVAAVLR AGNAHASKGA AAILKRIIRR LKHAYPGATI
LVRADAGFAV PAIYRLLERE KVKYTIGLIT NDRLRKRAAN LVIKAERQFA KTGAKQRLFG
SFYHRAGSWQ RSRRVIAKVE RLSRGLNTRF VVTNILESAA GIYDGIYTGR GDAENRIKEL
KVHLKADRLS CTRFQANQFR LLLHTFAFVL FWHLRRSLAG TELAAATVDT LKLKLLKVGA
RVVQSVRRIL FTMPRAYPYQ RLFATALQNI RQMPLRC