Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2023 |
Symbol | |
ID | 4459654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 2476088 |
End bp | 2478058 |
Gene Length | 1971 bp |
Protein Length | 656 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639702789 |
Product | hypothetical protein |
Protein accession | YP_846141 |
Protein GI | 116749454 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.446279 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTTTC AAATAAAAGA GATCGTCCTC TGGCCGAAAA ATGGAAGCCT GGAGCCTCGT CGCCTGCCGT TCGAGAAGGG CAAAGTAAAC GTTATCAGCG GCGGTTCCAG GACTGGAAAA TCAGCAATCA TACCGATCAT AGATTATTGC CTTGGTTCCA AAAAATGCAG GATTCCAGTA AACACTATCC GGAACTCATG CGAATGGTTT GGAGTAGTAG TCCAGACAGG TACCGGCGAG AAACTGTTTG CCAGACGCGA ACCTGGGTTT CAAAAAGCGA CGGGCGACAT GTTCATTATT GAAGGTAAAG AAGTGGAAGT TCCTGAAAAG ATTAATCTCA AAAACAGCGG TGTCGAAGCG GTTAAGGCTA GTCTGGATGA ACTGGTTGGC TTGACGGCGC TGGATTTTGA CACCGAAAGC CTCGGCAGTG GGTTTAAGGG GCGTCCCAGT TTCAGGGACT TGTCGGCGTT TATGTTCCAA CCGCAGAACA TTGTGGCAAA CCCCGATGTG TTTTTTTACA AGGCTGATAC CTATGAGCAT CGCGAGAAGC TCAGGACTAT TTTCCCCTAT GTTCTTGATG CGATAAATCC GCAGATCCTG GCAATGCAGC ATGAACTTGC CCAACTAAAG AAGGACCTCA GAAGAAAACA GGCCGAGTAC GAAAACATCA AGCTGGTTTC CGAGCGATGG TTAGCCGAAT TGCACGCCAA GATTTCCGAG GCCAGAGAAC TGGGTTTGAT TAAAGCGGTG GTTCCCGAGG ACGCTTCCCG AGAACAAATG ATAGAAATCC TAGCCGCTGT GGCGAAATTC TCCGGAGATG AGATTAAAGT CACTGAGCAA AGCGTGAACG AAGCCATTGA GGAACTGAGG CGACTTGAAG ATGAGGAAAG GAGCGCTTCC TTTGAGCTTT CTGAGCTTAG AGGCCGCTTG GACGAGATGT CTGCTCTCAG GCAAAGCACC GTGACCTATC ATGGGGCACT CCACATTCAA AGGGACAGAC TCAAAGTATC GGAATGGATG CTCAACAACC TTGACAAAGA ACAAGAGTGC CCGATGTGTG GCAGTTCCTC TATTCAGGTC GATGAGAAGC TGGAGTGGCT GCATAAAGCG CTTAAAGAGA TAGAGAAAAC AGCTGGAGAG TTCGAGCAGG TCCCAGCAGC GTTCGACCGA GAATTTGAAA GGGTCGGGAG AGAAATGCGG GACGCCTCTG AAAGACTACG CGGCATCCGG ATCAGAATCA GTGCTCTTAG GAAGACTTCT GAGCAGGCTC AAAAGCGGCG TTACGACGCG CTGCAAACGT CTCGGTTCAT TGGAGGCCTG GAAGAAGCTC TTCAGATGTA TTCGAGAATC GGAACCGATA GTGTATTGTG GAACGAAATC AGTGACCTGC GAGAAAAGAT CACCGCTCGC GAGAACCAGA TATCGGAACG TGAAATAAGG GAAAGAACTA GGCGGGCTCT GCGAAAGGTC GAATCGAACG CCGGGAGAAT TTTGCCACAT CTGGATACTG AGAGACCTGA CGATCCTGTC AGTTTGTTGA TCAATGACCT CACGATCAAA ATAGGGGGAG TCTCAAGGGA AGATTATTTA TGGGAAATCG GAAGTGGCTC CAACTGGCTC TCATATCACA TCGCCGTGAT GGTAGGATTG CATCAGTTTT TTTTGTCTCT TAGATACAGC CCTGTTCCTT CCTTTCTTAT TTTAGATCAG CCGAGCCAAG TCTATTTTCC TAAGACTCTC TCATTAAAGG AATACGATGA GGGAAAGGAG ATTGCTTTAC GTGATGAGGA CGTCGTCGCA GTACGCAAAG CATTTTTAGC TTTGTCTGTT GCGGTAACAG CGAGCAAAGG AGGATTCCAG GTTATTGTAC TCGATCATGC TACAGAAAAC GTTTGGGGTA ATATCTCAAA TGTCCATCTG GTTGAAGAAT GGCGTGATGG CAAGAAATTA ATTCCTCCGT CTTGGGAATA A
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Protein sequence | MFFQIKEIVL WPKNGSLEPR RLPFEKGKVN VISGGSRTGK SAIIPIIDYC LGSKKCRIPV NTIRNSCEWF GVVVQTGTGE KLFARREPGF QKATGDMFII EGKEVEVPEK INLKNSGVEA VKASLDELVG LTALDFDTES LGSGFKGRPS FRDLSAFMFQ PQNIVANPDV FFYKADTYEH REKLRTIFPY VLDAINPQIL AMQHELAQLK KDLRRKQAEY ENIKLVSERW LAELHAKISE ARELGLIKAV VPEDASREQM IEILAAVAKF SGDEIKVTEQ SVNEAIEELR RLEDEERSAS FELSELRGRL DEMSALRQST VTYHGALHIQ RDRLKVSEWM LNNLDKEQEC PMCGSSSIQV DEKLEWLHKA LKEIEKTAGE FEQVPAAFDR EFERVGREMR DASERLRGIR IRISALRKTS EQAQKRRYDA LQTSRFIGGL EEALQMYSRI GTDSVLWNEI SDLREKITAR ENQISEREIR ERTRRALRKV ESNAGRILPH LDTERPDDPV SLLINDLTIK IGGVSREDYL WEIGSGSNWL SYHIAVMVGL HQFFLSLRYS PVPSFLILDQ PSQVYFPKTL SLKEYDEGKE IALRDEDVVA VRKAFLALSV AVTASKGGFQ VIVLDHATEN VWGNISNVHL VEEWRDGKKL IPPSWE
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