Gene Sfum_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2023 
Symbol 
ID4459654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2476088 
End bp2478058 
Gene Length1971 bp 
Protein Length656 aa 
Translation table11 
GC content48% 
IMG OID639702789 
Producthypothetical protein 
Protein accessionYP_846141 
Protein GI116749454 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.446279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTTC AAATAAAAGA GATCGTCCTC TGGCCGAAAA ATGGAAGCCT GGAGCCTCGT 
CGCCTGCCGT TCGAGAAGGG CAAAGTAAAC GTTATCAGCG GCGGTTCCAG GACTGGAAAA
TCAGCAATCA TACCGATCAT AGATTATTGC CTTGGTTCCA AAAAATGCAG GATTCCAGTA
AACACTATCC GGAACTCATG CGAATGGTTT GGAGTAGTAG TCCAGACAGG TACCGGCGAG
AAACTGTTTG CCAGACGCGA ACCTGGGTTT CAAAAAGCGA CGGGCGACAT GTTCATTATT
GAAGGTAAAG AAGTGGAAGT TCCTGAAAAG ATTAATCTCA AAAACAGCGG TGTCGAAGCG
GTTAAGGCTA GTCTGGATGA ACTGGTTGGC TTGACGGCGC TGGATTTTGA CACCGAAAGC
CTCGGCAGTG GGTTTAAGGG GCGTCCCAGT TTCAGGGACT TGTCGGCGTT TATGTTCCAA
CCGCAGAACA TTGTGGCAAA CCCCGATGTG TTTTTTTACA AGGCTGATAC CTATGAGCAT
CGCGAGAAGC TCAGGACTAT TTTCCCCTAT GTTCTTGATG CGATAAATCC GCAGATCCTG
GCAATGCAGC ATGAACTTGC CCAACTAAAG AAGGACCTCA GAAGAAAACA GGCCGAGTAC
GAAAACATCA AGCTGGTTTC CGAGCGATGG TTAGCCGAAT TGCACGCCAA GATTTCCGAG
GCCAGAGAAC TGGGTTTGAT TAAAGCGGTG GTTCCCGAGG ACGCTTCCCG AGAACAAATG
ATAGAAATCC TAGCCGCTGT GGCGAAATTC TCCGGAGATG AGATTAAAGT CACTGAGCAA
AGCGTGAACG AAGCCATTGA GGAACTGAGG CGACTTGAAG ATGAGGAAAG GAGCGCTTCC
TTTGAGCTTT CTGAGCTTAG AGGCCGCTTG GACGAGATGT CTGCTCTCAG GCAAAGCACC
GTGACCTATC ATGGGGCACT CCACATTCAA AGGGACAGAC TCAAAGTATC GGAATGGATG
CTCAACAACC TTGACAAAGA ACAAGAGTGC CCGATGTGTG GCAGTTCCTC TATTCAGGTC
GATGAGAAGC TGGAGTGGCT GCATAAAGCG CTTAAAGAGA TAGAGAAAAC AGCTGGAGAG
TTCGAGCAGG TCCCAGCAGC GTTCGACCGA GAATTTGAAA GGGTCGGGAG AGAAATGCGG
GACGCCTCTG AAAGACTACG CGGCATCCGG ATCAGAATCA GTGCTCTTAG GAAGACTTCT
GAGCAGGCTC AAAAGCGGCG TTACGACGCG CTGCAAACGT CTCGGTTCAT TGGAGGCCTG
GAAGAAGCTC TTCAGATGTA TTCGAGAATC GGAACCGATA GTGTATTGTG GAACGAAATC
AGTGACCTGC GAGAAAAGAT CACCGCTCGC GAGAACCAGA TATCGGAACG TGAAATAAGG
GAAAGAACTA GGCGGGCTCT GCGAAAGGTC GAATCGAACG CCGGGAGAAT TTTGCCACAT
CTGGATACTG AGAGACCTGA CGATCCTGTC AGTTTGTTGA TCAATGACCT CACGATCAAA
ATAGGGGGAG TCTCAAGGGA AGATTATTTA TGGGAAATCG GAAGTGGCTC CAACTGGCTC
TCATATCACA TCGCCGTGAT GGTAGGATTG CATCAGTTTT TTTTGTCTCT TAGATACAGC
CCTGTTCCTT CCTTTCTTAT TTTAGATCAG CCGAGCCAAG TCTATTTTCC TAAGACTCTC
TCATTAAAGG AATACGATGA GGGAAAGGAG ATTGCTTTAC GTGATGAGGA CGTCGTCGCA
GTACGCAAAG CATTTTTAGC TTTGTCTGTT GCGGTAACAG CGAGCAAAGG AGGATTCCAG
GTTATTGTAC TCGATCATGC TACAGAAAAC GTTTGGGGTA ATATCTCAAA TGTCCATCTG
GTTGAAGAAT GGCGTGATGG CAAGAAATTA ATTCCTCCGT CTTGGGAATA A
 
Protein sequence
MFFQIKEIVL WPKNGSLEPR RLPFEKGKVN VISGGSRTGK SAIIPIIDYC LGSKKCRIPV 
NTIRNSCEWF GVVVQTGTGE KLFARREPGF QKATGDMFII EGKEVEVPEK INLKNSGVEA
VKASLDELVG LTALDFDTES LGSGFKGRPS FRDLSAFMFQ PQNIVANPDV FFYKADTYEH
REKLRTIFPY VLDAINPQIL AMQHELAQLK KDLRRKQAEY ENIKLVSERW LAELHAKISE
ARELGLIKAV VPEDASREQM IEILAAVAKF SGDEIKVTEQ SVNEAIEELR RLEDEERSAS
FELSELRGRL DEMSALRQST VTYHGALHIQ RDRLKVSEWM LNNLDKEQEC PMCGSSSIQV
DEKLEWLHKA LKEIEKTAGE FEQVPAAFDR EFERVGREMR DASERLRGIR IRISALRKTS
EQAQKRRYDA LQTSRFIGGL EEALQMYSRI GTDSVLWNEI SDLREKITAR ENQISEREIR
ERTRRALRKV ESNAGRILPH LDTERPDDPV SLLINDLTIK IGGVSREDYL WEIGSGSNWL
SYHIAVMVGL HQFFLSLRYS PVPSFLILDQ PSQVYFPKTL SLKEYDEGKE IALRDEDVVA
VRKAFLALSV AVTASKGGFQ VIVLDHATEN VWGNISNVHL VEEWRDGKKL IPPSWE