Gene Sfum_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2012 
Symbol 
ID4459678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2461596 
End bp2463899 
Gene Length2304 bp 
Protein Length767 aa 
Translation table11 
GC content65% 
IMG OID639702778 
Productaldehyde oxidase and xanthine dehydrogenase, molybdopterin binding 
Protein accessionYP_846130 
Protein GI116749443 
COG category[C] Energy production and conversion 
COG ID[COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.505278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTGC GCCACGGGAC GCTGGAGATC GGATGCCCGG TTCCACGGGT TGACGCCGCC 
GCGAAAGTCA CCGGCGAAGA GAAGTATGCG ATCGACCACA CCCCGGAAAA CATGCTCTGG
GCCGGGGTGA GGCGGGCCGG AGTACCTCAC GGAAGGCTGA GGACCGTCCA TGTGGAGGAG
GCGAGAGCGC TTCCGGGGGT CCTGTGCGTC CTTACGGCCT CCGACGTTCC GGGGACCAAC
CGCCAGGGGA TCGTCCACAA GGACCAGCCC GTTCTGGCCG TGGACCGCGT CAGGCACTGC
GGCGATCCGG TGGCGCTGGT TCTGGCCGAG GACCGGGAAA CGCTGGCGAA GGCTCTCGCC
CTGGTCGTGC CGGACATCGA GCCGCTCCCT TCCGTGCACA GCCCCGAGGA AGCGTTGAGA
CCCGATGCGC CCGCGATCCA CGACAGTGGG AACGTTCTGC TGCGGGCCGT CATAGAAAAA
GGCGATGCGG GCGGTGCCTT CGGGGAGTGC GACGCGGTCG TGGAGGAAAC GTTCGAAGTC
CCCTTCCAGG AACACGCTTT CCTGGAAACC CAGAACGGGA TCGCGCACCG GGAAGCCGAC
GGAAAGCTCG TCATGACCGT CTCGACCCAG GCGCCGTTCA GAGACCGTTT CGAGATCGCT
CACGCCCTGG GGCTCGATCC GTTCTCGATC CGGATTATCA GTCCCTACCT CGGCGGGGGA
TTTGGCGGAA AGGACGGCGC CACCGTGCAG TGCCTGCTCG CCCTGGCGGC CATGCACGCG
GGGGGGCGTC CGGTCAGGAT GACGTGGGAG AGGGAGGAAA GCTTCATCGC CGGGTACAAG
CGCCACGCCG TGAAAATGCA TTACCGCGTC GGGGCGAAAC GGGACGGAAC CCTGCACGCG
CTCGAATGCG ACCTCTACTA CGACACCGGG GCCTACGCGC ATCTCGGCGC AGAGGTCATG
GAACTCGGGA TGGAGCATGC CGGGGGGCCC TATCGCATTC CCAACGTCCG GGTGAAAGGG
TGGTGCGTGT ACACGAACAA TCCCATCGCA GGCGCCATGC GCGGATTCGG GGTATGCCAG
ACGGCCTTCG CCGTAGAGAG CGTGATGGAC ATGCTCGCCG CAAAGCTGAA CCTGGATCCC
CTGGAATTTC GGAGGAAAAA TGCCCTTCGA CGCGGGGACG AGAACTGCGC GGGGGTGACG
ATGGTCCATT CCACGGGGAT TGGTGCGTGC CTCGAGACGT TGAGCCGCCA CCCGTTCTGG
CTGGAACGGC GGGATTGGAA GCGGGCGGCT CCGCCCTTCA AGCGCCGGGG CGTAGGTCTT
GCAGCGGTTT TCAATGCCAT GGGCTACGGG CGCGGGCTCC CCGATTCCGC CATCGCCAGG
CTGGAACTGA CTCTCGACGG CAGAATCCGG ATCTACTGCG GCGTTTCGGA CATGGGACAG
GGGAACTCCG CGGCGTTCGT TCAGATTGCC GGGGAAATCC TCTGCCAGGA CGCTTCCCGC
CTGGAACTGA TACTGCCGGA CACCGACCGG ACGCATCCTT CGGGCTCCTC GTCGGCAGGC
CGAACCACCT ACACCTTCGG CAATGCCCTC GTCCAAGCCT GTAACGCCTT GAAGGAGAAG
CTGTTTCACC GGGCGGCGCT GGTGCTCATG CTGGACGAAG AGAAAGGACT GGCCCTGCTG
CCGGGAAGAG TGCGGCATCT TCCGTCGGGG CGGGAGGCCT CGTTCGAGTT GCTGGCCCGG
ATGCTGCCCG AGGCGGACCG GGCGAGTGTC GGGCAGTTCA TCATGCCCGT GGCGCACGAT
GTGCCGGATA CCGGGAAGGA GTTTGCCATC GGCTTCCCGC ACGTGTTCTT CGCCTATGCC
GCTCACCTCG CCCGCGTGGA AGTGGACGAG TTGACCGGCC GGATCGAAGT CACCGAATAC
CTGGCCGTAA CGGACGGGGG AAAAGTGATC AATCCGCAGG GCTTCGAACA GCAGGTTCAC
GGGAGCGTCG CCCAGGGGCT CGGCTATGCC CTCACCGAAC AGCTTCTTTT GGACCGGGGC
GCGATTCTGA ATGCCGGTTT CGCCGATTAC ATCCTGCCGA CCGCCCTGGA TGTTCCGGAA
ATCATTTCCG TGGCGGCCGA GACGTTTGAA CACACGGGAC CGTTCGGCAT GAAAGGGATC
GGTGAAGTGG GAACGAACGG GCCGCTGCCG GCCGTGGCAA ATGCCGTGAA CGACGCCCTG
GGGCGACGCC TGACGCGCTC GCCCCTGACG GCGTCACGCA TTTTGCGCGC CATGGAAGAG
GGACCGGCAC AGCCGGTGAC GTGA
 
Protein sequence
MTLRHGTLEI GCPVPRVDAA AKVTGEEKYA IDHTPENMLW AGVRRAGVPH GRLRTVHVEE 
ARALPGVLCV LTASDVPGTN RQGIVHKDQP VLAVDRVRHC GDPVALVLAE DRETLAKALA
LVVPDIEPLP SVHSPEEALR PDAPAIHDSG NVLLRAVIEK GDAGGAFGEC DAVVEETFEV
PFQEHAFLET QNGIAHREAD GKLVMTVSTQ APFRDRFEIA HALGLDPFSI RIISPYLGGG
FGGKDGATVQ CLLALAAMHA GGRPVRMTWE REESFIAGYK RHAVKMHYRV GAKRDGTLHA
LECDLYYDTG AYAHLGAEVM ELGMEHAGGP YRIPNVRVKG WCVYTNNPIA GAMRGFGVCQ
TAFAVESVMD MLAAKLNLDP LEFRRKNALR RGDENCAGVT MVHSTGIGAC LETLSRHPFW
LERRDWKRAA PPFKRRGVGL AAVFNAMGYG RGLPDSAIAR LELTLDGRIR IYCGVSDMGQ
GNSAAFVQIA GEILCQDASR LELILPDTDR THPSGSSSAG RTTYTFGNAL VQACNALKEK
LFHRAALVLM LDEEKGLALL PGRVRHLPSG REASFELLAR MLPEADRASV GQFIMPVAHD
VPDTGKEFAI GFPHVFFAYA AHLARVEVDE LTGRIEVTEY LAVTDGGKVI NPQGFEQQVH
GSVAQGLGYA LTEQLLLDRG AILNAGFADY ILPTALDVPE IISVAAETFE HTGPFGMKGI
GEVGTNGPLP AVANAVNDAL GRRLTRSPLT ASRILRAMEE GPAQPVT