Gene Sfum_2004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2004 
Symbol 
ID4459670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2453642 
End bp2454136 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content55% 
IMG OID639702770 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_846122 
Protein GI116749435 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.14606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATACG CTTTCGAACC CATTACACGG AAACACCGCG AGGCGGTCAT CGACATCTTC 
AACCACTTCG TCGTGAACAG CTACGCCGCC TATCCCGAAA GACCCGTCGA GTACGACTTC
TTCGATTACC TCTACGTGGA ACCCCGGGAT TACCCCGCGG TCGCTGTCAC CAGCGAAACG
GCCGGGATCG TCGGCTTCGG CTTCATGCGG CCGTATGATT CGGACGAATC CTTCAAGCAT
ACCGCCGAGG TGACCTATTT CATATTGCCT TCCCATACGG GAAAGGGACT TGGCACCGGC
ATGCTGCGCC TGTTCTGCGA TCAGGCTCTG CATAGGGGGA TACGGTCCCT GATGGCCAAC
ATATCCTCAT TGAACGATGC GAGCATCAGC TTCCACCTGA AGAATGGTTT TCAGGAGTGG
GGAAGATTCT ATAGGGTCGG TTCGAAATTC GGGGTGGAGT TCGACGTCCT CTGGATGGAG
AAATGCTTGA AATGA
 
Protein sequence
MEYAFEPITR KHREAVIDIF NHFVVNSYAA YPERPVEYDF FDYLYVEPRD YPAVAVTSET 
AGIVGFGFMR PYDSDESFKH TAEVTYFILP SHTGKGLGTG MLRLFCDQAL HRGIRSLMAN
ISSLNDASIS FHLKNGFQEW GRFYRVGSKF GVEFDVLWME KCLK