Gene Sfum_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2000 
Symbol 
ID4459701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2449966 
End bp2450631 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content53% 
IMG OID639702766 
Productfumarate reductase respiratory complex, transmembrane subunit 
Protein accessionYP_846118 
Protein GI116749431 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000135298 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACC AAACTTTAGC AGCTCGAGTG GAACCTGTAC GAACCGATGC CTATTTGGAT 
TTTTTCCAAA TGCTGACCGG GGTCTTGCTG GTCTTGTTCA TGTGGATGCA TATGATCCTG
GTAGCCAGCG TCAACCTCGA CTTCGGGGGG GGGCGGGTAA TGAACTGGAT CGCCCACTTC
TTCGAAGCCA CCTACATGGC ACAGCTTGGC GGTCCGATGA TTTTTCTCAC CATGCTCGCC
CATTTTGTGC TTGCCTCGCG CAAACTCCCG TTCCAGGCCC GTGAACAGAA GGCCATCTGG
GCTCACAGCA AGCGCATGAA CCATCTGGAC ACGTGGTTGT GGATGGTCCA GGCGGCGACG
GCCTTCATCA TTCTTGTCAT GGGCTCCATC CACATGTGGG TGGTGCTGAC GAATCTCCCC
ATTACCGCCG CAAGGAGCGG GGCTCGCATC CAGACCGGTT GGTGGTTGCT CTTCTACATG
GTTTTGCTGC CGATGATCGA GCTCCATGTG GGTATCGGCA TCTACCGGAT CGGAGTGAAG
TGGGGCTACA TCAAACGAGC CAACCGCTCA TTCTTCCACA GTCTTGAGAA CAAAGTCACA
CTGGTTTTCA TAACGATTGG GGCGATTACT CTGTTTACCT TCTATGTCTT AGTTAAACCT
ATGTAA
 
Protein sequence
MSDQTLAARV EPVRTDAYLD FFQMLTGVLL VLFMWMHMIL VASVNLDFGG GRVMNWIAHF 
FEATYMAQLG GPMIFLTMLA HFVLASRKLP FQAREQKAIW AHSKRMNHLD TWLWMVQAAT
AFIILVMGSI HMWVVLTNLP ITAARSGARI QTGWWLLFYM VLLPMIELHV GIGIYRIGVK
WGYIKRANRS FFHSLENKVT LVFITIGAIT LFTFYVLVKP M