Gene Sfum_1997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1997 
Symbol 
ID4459698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2446022 
End bp2446936 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content56% 
IMG OID639702763 
Productputative acyltransferase 
Protein accessionYP_846115 
Protein GI116749428 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.478455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAATC GTATATTCGG CCCACTGCGC GCCGGCTTCA TCCTCCTGGT TTATACGCTC 
AACACGCTTT TCTGGACGAC GCTCCTTTTC CCCGTCGCCC TTTTGAAATG GCTCGTTCGC
GGGGGAAGCA GCACCGGATT GTTCGATCGA TTGCTGCATT GCATAGCCAA CAGTTGGATC
GCCGTCAACA ATTTGAACAT GCGTTATTTG AATCGGGTCC GTCTGGATAT CGAGGGCACG
GATTCACTGA AACCCCAGGA ATGGTACCTG GTGGTATCCA ATCACCAGTC CTGGGCAGAC
ATCCTTGTGC TGCAAAAGAT CTTTCACCGC AGGATTCCCC TGCTCAAGTT CTTCCTCAAG
AAAGAGCTCA TCTGGATGCC GTTTCTCGGC TTTGCCTGGT GGGCGCTGGA CTTCCCCTTC
ATGAAGCGCT ATTCGAAGAG CTATTTGAAG AAACACCCCG AACGCGCGGG CATGGATCTC
GAGATCACAC GGAAGGCCTG CGAGAAATTC AAGAACATCC CCATATCGGT GATGAACTTC
GTGGAAGGCA CCCGTTTCAC TCCCAAAAAG CATCGAGAGC AGGATTCGCC GTACCGCCAT
CTGCTCAGGC CCAAAGCCGG CGGCGTTGCC ATGGTTCTTG CCGCCATGGG AGACAGGATG
CGCCACATCC TCGACGTCAC CATCGCCTAT CCGGGGGAAA ACAGGGGGTT CTGGGCGTTC
CTGCGCGGCG ATGTCACCGA CATCAAGGTC CGGGTCAAAT CGCTTTTCGT CGGCGAAGAC
CTGATCGGCG ACTACTTCTC GGACGAGGTC TTTCGCGAGC GGTTTCAGAA CTGGCTGGGA
ACGCTGTGGG TTGACAAGGA CGACCTCATG CAAAAGCTGC TCGGCGTCAC CCGTGTGGGC
CCGACCGAAG GATGA
 
Protein sequence
MNNRIFGPLR AGFILLVYTL NTLFWTTLLF PVALLKWLVR GGSSTGLFDR LLHCIANSWI 
AVNNLNMRYL NRVRLDIEGT DSLKPQEWYL VVSNHQSWAD ILVLQKIFHR RIPLLKFFLK
KELIWMPFLG FAWWALDFPF MKRYSKSYLK KHPERAGMDL EITRKACEKF KNIPISVMNF
VEGTRFTPKK HREQDSPYRH LLRPKAGGVA MVLAAMGDRM RHILDVTIAY PGENRGFWAF
LRGDVTDIKV RVKSLFVGED LIGDYFSDEV FRERFQNWLG TLWVDKDDLM QKLLGVTRVG
PTEG