Gene Sfum_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1993 
Symbol 
ID4459694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2439614 
End bp2440420 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content61% 
IMG OID639702759 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_846111 
Protein GI116749424 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGCTG GAGCGGTGAA ATGCGCGGTT ATTGTCTGTG CGGTGGTCCT GGGTTTGGCT 
TGCTTCGGAG CGCGGGATCA ATGCCGTTGC GCCGATGTTG CGGCACGGAA CGGAACGCAA
ATCGAGCAGT TCGTCTCAGG CGTGGACGGC GAGGAGCAGA CTCCGAAGCT CACCTGGACT
GAGAAGGTGA TCGGCGAGGA CGAGCTGTGG AATTCCTGCG AAAAGGCCGC CCGGATTGAC
CCGATCCTTT GTCGGGAGAT ACTCGCGCGG CTCAATCGCC GGGCACATTA CTACATCTAT
GACGACATCC GGCACGGGCG GCCCATCAAA GTGCCGGACG ACTTCGCCGA TTTCCGGGAC
TGGACCCCGA TGCCCCGGTT TCTGCCTCGG TTCGCCGACA TTCCGAGACT CATCGTGGTG
GTCAGGAGCA TTCCTTTTCT CGGCTGGTAC GAAATGGGAC ACATGGCGGG GGACGCCCTG
GCGTGCATCG GAACGAAAGC CGAACCCACC GAAAGGGGTT TCTACAAAGT CCTGGAGAAA
GACCCCGATC ATTACTCCAG GAGTTACTCC AACGACTTCG GGGAACCGGC CTGGATGCCG
TGGGCACTGC GGGTCTACGA CACGGTTTGG ATCCACGCGG GAGACGTCTC CAACGCGTAT
TGCTCTCACG GGTGCGTCAT CCTTCCCCCG AAGCGCGCGC AGGACCTCTA CGAGTGGGCC
GACAAAGGCA CTCCGGTGGT GATCGTCGAT TCCGTAAAGG ACCTGGACGG CACGGCACCC
GGCAAATCCG GCATCCGCAG CCGTTGA
 
Protein sequence
MVAGAVKCAV IVCAVVLGLA CFGARDQCRC ADVAARNGTQ IEQFVSGVDG EEQTPKLTWT 
EKVIGEDELW NSCEKAARID PILCREILAR LNRRAHYYIY DDIRHGRPIK VPDDFADFRD
WTPMPRFLPR FADIPRLIVV VRSIPFLGWY EMGHMAGDAL ACIGTKAEPT ERGFYKVLEK
DPDHYSRSYS NDFGEPAWMP WALRVYDTVW IHAGDVSNAY CSHGCVILPP KRAQDLYEWA
DKGTPVVIVD SVKDLDGTAP GKSGIRSR