Gene Sfum_1991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1991 
Symbol 
ID4459692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2436517 
End bp2438451 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content60% 
IMG OID639702757 
Productferredoxin 
Protein accessionYP_846109 
Protein GI116749422 
COG category[R] General function prediction only 
COG ID[COG3894] Uncharacterized metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.210098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGGA ATGTCATTTT TGAACCATAC GGAATCACGA TTGCCGTGGA AGATGGGGAG 
AACCTCCTCC GCGCGGCCCT GGATGCAGGC GTGCACGTCA ATGCTTCGTG CGGCGGCCAG
GGGGTTTGCG GGAAGTGTAG AGTGATCCTG GAATTCGGGG AATTGGAAAC GGATCCCGGT
GAGAACATCG GCGAGTCCGA CTGGAACGCC GGATACCGTA ATGCCTGTCG GAGCCGGGTG
TATTCGGACG TAGTGGTTCG GATTCCTCCG GAATCCCTGC TGGATCGGCG CTCGATCCTG
CGCCGTCATC CCGGAATCGC CCTTCGACCC AGCCCCATCG ATTTCAAGGC CATCAAAGCC
GCGGGCCTCT ACAGTCCGGC ATTTGAAAAG AGGCTTGTCG AGCTCACGCC GCCGACTCTC
ATGAACAACC TCTGCGACAT GTCCCGGCTG GAGGCCGGCC TCGCGCGCCG GCACGGGCTG
GATGCCGTCA CCCTCGACTT CTATCTGACC CGGGCGCTGA GTCGGGCGTT GCGGGAGAAC
AACTTTGAGG TGACGGCGAC GCTCGACTTC TCGCGCCGCC GCTATCATTT CCCCCATGTG
CTGAATGTGG AGGGGGGGGA TACCACGCAG CGGCATCTGG CTTTCGCAGT CGATATCGGC
ACCACGACCG TGTGGGTGCA ACTCATCGAC ATCGCCGCGG GGGAAGTCCT GGGCCATGCG
GCCGACTACA ACGGTCAGTT GACCTACGGG GACGATGTCA TCACGCGGAT CATGTACAGC
CAGAAAGAAC AGGGACTCAA GCGCTTGCAG GAAGCGGTGG TCGCCACCAT CAACCGGCTC
ATGCACCAAC TTCTCCACAA ACATGCCATT CCGGCGGATG AAATTTCGCA CATCACCATG
GCGGCCAACA CCACCATGAC GCATCTGTTC TACGGTATCG ATCCGGGTTC CATACGTCTG
TCACCTTACG TTCCGACGGT CTGCAACGTC CCGTTGGTGA GAGCCCGCGA TCTGGGGCTC
GATGTCCCTC CCCACGTGTT CATCAACTGC GTGACGTCGG TGTCCAGCTA CGTGGGCGGC
GACATTGTGG CGGGGGTATT GGCTTCGGGG ATATACAAGG ACCCCAGGCT CACGCTCTAT
ATCGATCTGG GCACCAATGG GGAAATCGTG ATCGGCAACG AGCAGTGGCT TGCGTGCGCC
GCCTGCTCGG CAGGACCGGC CTTTGAAGGA GGCGGCATCA AGCACGGCAT GCGGGCGACC
GTTGGGGCCA TCGAAGAGGT GAGCGTCAAT CCCGAGAACT ACGAACCGAT GATCATCACC
ATCGGCATGA CCAAGCCGAA AGGCCTCTGC GGATCGGGCA TGATCAACCT GATGGCGGCC
TTGATGGAGT CGAGCCTGTT GGAGCCCAAC GGTCGGTTTC GAACCGACCT GAATACGCCG
CGGCTCAGGA TGGGTGAATT CGGCAGGGAG TACGTCGTCG CATATGCCGA GGACAATCAG
ATCGGTCAGG ACATCACATT CAGCGAAGCG GATGTGGACA ACCTGATCCG GGCCAAGGCG
GCGATGTTCG CCGGTTACGT GACTCTGTTG GAGAGTGTTG GGATAGAGTT CGGGGACATC
GACCAGGTCA TCCTTGCGGG CGGATTCGGC AACTTCATCA ATATCGAGAA TGCCGTCACC
ATCGGAATCC TCCCGGATTT GCCCCGGGAA CGGTTTCAGT TCGTCGGCAA CGGTTCGCTC
CAAGGGGCCA CCCTGATGGC ATTGGCCCGG GAACTACTGG ATCAGGAACG CCGGGTGGCC
GGCATGATGA CCAATTTCGA TCTCTCCGAA GTCCCCAGCT ACATGAGTCA CTATGTGGCC
GCGTTGTTTC TGCCTCACAC GAAAGCCGAA TTCTTTCCGA CGGTTACGGA GCGACTGCGA
ATGCAGAAAC CCTGA
 
Protein sequence
MTRNVIFEPY GITIAVEDGE NLLRAALDAG VHVNASCGGQ GVCGKCRVIL EFGELETDPG 
ENIGESDWNA GYRNACRSRV YSDVVVRIPP ESLLDRRSIL RRHPGIALRP SPIDFKAIKA
AGLYSPAFEK RLVELTPPTL MNNLCDMSRL EAGLARRHGL DAVTLDFYLT RALSRALREN
NFEVTATLDF SRRRYHFPHV LNVEGGDTTQ RHLAFAVDIG TTTVWVQLID IAAGEVLGHA
ADYNGQLTYG DDVITRIMYS QKEQGLKRLQ EAVVATINRL MHQLLHKHAI PADEISHITM
AANTTMTHLF YGIDPGSIRL SPYVPTVCNV PLVRARDLGL DVPPHVFINC VTSVSSYVGG
DIVAGVLASG IYKDPRLTLY IDLGTNGEIV IGNEQWLACA ACSAGPAFEG GGIKHGMRAT
VGAIEEVSVN PENYEPMIIT IGMTKPKGLC GSGMINLMAA LMESSLLEPN GRFRTDLNTP
RLRMGEFGRE YVVAYAEDNQ IGQDITFSEA DVDNLIRAKA AMFAGYVTLL ESVGIEFGDI
DQVILAGGFG NFINIENAVT IGILPDLPRE RFQFVGNGSL QGATLMALAR ELLDQERRVA
GMMTNFDLSE VPSYMSHYVA ALFLPHTKAE FFPTVTERLR MQKP