Gene Sfum_1979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1979 
Symbol 
ID4459715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2423135 
End bp2423983 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content61% 
IMG OID639702745 
Productphosphotransferase domain-containing protein 
Protein accessionYP_846097 
Protein GI116749410 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4464] Capsular polysaccharide biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAG ACAGAAACCC GCCGGCTGAG AAGACCGATC GCATCCTTGA TCTGCACAAT 
CATATCCTGC CGGGACTCGA CGACGGAGCC GACGACTGGC CGCAGAGCCT GGCCATGGCA
CGGCTGGCGG TGGACGACGG CGTTTCGGGC ATCGTCTGCA CCCCGCACTG GATTTCCGGC
TTCTACGACA ATACGGCGGA GATGGTTCTC GACCGCCTGG AATCCTTCAG ACGCAAGCTC
GCCGAAGAAC GGATTCCCTT GTCGGTGTAC CCGGGCTCCG AACTGCGCCT GGATGCCGAC
CTGGCGGGCA AGATCAAGTC CAGAGAGGTG CTCACTATCA ACGATACGGG GCGATATGCG
CTGATCGAGT TCCCCGACCG ATTTCTGCCG GGCAACATGG ACCATGTTTT CTGGCAGCTG
CAATCCAATG AAATCACGCC GGTCCTGAGC CATCCCGAGA GGCATGGGCA CCTGATGCGC
AATGCACCGC TCATCTATCG CTGGGTGGAG ATGGGAGTCC TCGTCCAGAT CACGTCGGCA
AGCCTTCTCG GGCGATTTGG AAGCGAGGTG CGGAGGTTTT CCGTTCTCCT CATGTCTCAC
AACCTCGCTC ATATCCTGGC AACGGATGCG CACGGCCTCC ATGTGCGCAC TCCCCGGCTC
TCCGATGGCC TGAGCGCCGC CGTGTCCATA GTGGGCGAGG AATCGGCGCG CCGGATGGTC
GACGAGACGC CCTGGAGCAT CATCCGGGGC GAGCCCGTGA GACTGCCCGA CCCAGTGCCC
CTGCGCAAGG CATCCGTCGA TTCCCCGCTG AGAAGATTTT TTTCCCTGTT CGGCGTGCAT
CCTCATTAG
 
Protein sequence
MTEDRNPPAE KTDRILDLHN HILPGLDDGA DDWPQSLAMA RLAVDDGVSG IVCTPHWISG 
FYDNTAEMVL DRLESFRRKL AEERIPLSVY PGSELRLDAD LAGKIKSREV LTINDTGRYA
LIEFPDRFLP GNMDHVFWQL QSNEITPVLS HPERHGHLMR NAPLIYRWVE MGVLVQITSA
SLLGRFGSEV RRFSVLLMSH NLAHILATDA HGLHVRTPRL SDGLSAAVSI VGEESARRMV
DETPWSIIRG EPVRLPDPVP LRKASVDSPL RRFFSLFGVH PH