Gene Sfum_1972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1972 
Symbol 
ID4459708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2412078 
End bp2413028 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content60% 
IMG OID639702739 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_846091 
Protein GI116749404 
COG category[C] Energy production and conversion 
COG ID[COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCAT ATACCGAAAA GATCCGAGAA GCTGCAAAGC GCCTTCTGTC CGAACAGCGT 
GTGGATGTCG TGATCGGCTT TCGCAAGGGA ACCGTTCCGT TCATGAACGA ACCCTTCCTG
GCAAAAAGTC CCGACCAGGC CGATCAACTC TACTGGGACG GCAATTGCGG CATAAACCTG
GCCAACTACC TGCCCAAGAG AACCGATCGG ATTGCCATCG TCGCCAAGGG TTGTGATACC
CGCAGCATCG TGGTTCAGCT GCTGGAGTAC CAGATCCGGC GCGAGCAGCT CTACATCCTG
GGCGCCCCCT GTCACGGGAT GATCGACAGG CGCCGCATCG CGGACGAGCT CAACGGGAGG
GAACCCAGCC TGGTCGAGGA ATCGGATTCC GGCATCCGCA TCACCGGGCG GGACCTGGAC
TTGACGCTCG AACGCGGCTC CTTTCTGCAG GAAAATTGCG CCATATGCAT CCACCGGAAC
CCGGTCATCT ACGACGAGCT GTTGGGAGAG CCGGTGGCCG AACAACAAAA TGTCGACCGC
TATGAGGACG TGAAGGCGGT CGAGGCGATG GGGGCCCAGG AACGCTGGGA GTACTTCGAA
GACCTGATTG CCCCCTGCAT TCGCTGCTAT GCCTGCAGGA ATGCCTGCCC GGCATGCTAC
TGCCCTACCT GCTTCGTCGA TGAAGCCAGG CCCCAGTGGG TGGGCAAGAG TACCGACCCG
ACGGATACCC GGACCTTTCA CTTTCTCAGA GCCTACCATC TCGCCGGCCG TTGCACGGAT
TGCGGCGCGT GCGAGCGGGC CTGCCCCGTC GGGATCAAAG TTCGCCAGTT CACCAAGAAG
CTGGAGAAAG ACGTCAAGGA ACTCTACGGC TACGAGGTCG GATTGAGCCT GGATGAACGG
CCTTCGCTGG ACACGTACCG GCCGGGTGAT CCCGAGTCGT TCATAAAATG A
 
Protein sequence
MQAYTEKIRE AAKRLLSEQR VDVVIGFRKG TVPFMNEPFL AKSPDQADQL YWDGNCGINL 
ANYLPKRTDR IAIVAKGCDT RSIVVQLLEY QIRREQLYIL GAPCHGMIDR RRIADELNGR
EPSLVEESDS GIRITGRDLD LTLERGSFLQ ENCAICIHRN PVIYDELLGE PVAEQQNVDR
YEDVKAVEAM GAQERWEYFE DLIAPCIRCY ACRNACPACY CPTCFVDEAR PQWVGKSTDP
TDTRTFHFLR AYHLAGRCTD CGACERACPV GIKVRQFTKK LEKDVKELYG YEVGLSLDER
PSLDTYRPGD PESFIK