Gene Sfum_1967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1967 
Symbol 
ID4459738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2406939 
End bp2407337 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content60% 
IMG OID639702735 
Producthypothetical protein 
Protein accessionYP_846087 
Protein GI116749400 
COG category[S] Function unknown 
COG ID[COG0432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00149] secondary thiamine-phosphate synthase enzyme 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.990431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCCA CGGTTACGGT CAAAACGCCC GCGCACAGCG CAATGGTGGA CATCACCCCG 
TCGGTTTCGG CGAAAGTGCG TGAAAGCGGC GTACAGGAAG GCTGCTGCAT CGTCTATGTG
CCGCACACCA CGGCGGGAAT CACCATCAAC GAGGGCGCGG ACCCGGATGT GGTCGTGGAT
ATCCTGGCCG CGTTGGACAA ACTCGTCCCC TGGAAGGGCG CCTGGCGGCA TTCCGAAGGC
AATTCGGCGG CTCACGTCAA GACGGCTCTC ATGGGCGGCA GCGTCCACGT CATCATCGAA
GGGGGGCAAT TGGTGCTGGG GACTTGGGAA CGCATCTTCT TCTGTGAATT TGACGGTCCG
AGGACCCGCA AAGTTCACAT CAAGATCATG GACGGTTGA
 
Protein sequence
MIATVTVKTP AHSAMVDITP SVSAKVRESG VQEGCCIVYV PHTTAGITIN EGADPDVVVD 
ILAALDKLVP WKGAWRHSEG NSAAHVKTAL MGGSVHVIIE GGQLVLGTWE RIFFCEFDGP
RTRKVHIKIM DG