Gene Sfum_1966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1966 
Symbol 
ID4459737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2404480 
End bp2406618 
Gene Length2139 bp 
Protein Length712 aa 
Translation table11 
GC content61% 
IMG OID639702734 
ProductCoA-binding domain-containing protein 
Protein accessionYP_846086 
Protein GI116749399 
COG category[C] Energy production and conversion 
COG ID[COG1042] Acyl-CoA synthetase (NDP forming) 
TIGRFAM ID[TIGR02717] acetyl coenzyme A synthetase (ADP forming), alpha domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGC TCGATGCGAT TTTTGCCCCA AAGTCGGTTG CCGTTATCGG AGCTTCGACG 
AAACCCGGGA AAGTCGGTCA TGACATTTTC GTGAACATTC TCAAGGGGAA CTACCAGGGA
ACGCTCTATC CCGTCAATCC AACGGCCAAG TCCATCCAGT GCGTGCGTGC CTATCCCGCG
ATTTCCGACA TTCCGGATCC CGTGGACCTC GGAATCATCA TTCTCCCTCC GCCGGAGGCC
CTGAAGGCGG TGATGGAATC CGCGCGGGTG GGAATCAAAG GAATCGTGAT CGTGTCGGCG
GGTTTCAAGG AGGTCGGCGG GGAAGGACGG AAGATCGAGG AGCAGATCAC CGCGATCTGC
CGCGAGGCCG GGATGCGGCT GGTCGGCCCC AACTGCCTGG GCGTCATCAA TCCTCATCCC
GCGGTCAGGC TCAACGCCAG CTTTTCGGCC CGCATGCCCG CCTTCGGCGA GATTTCCTTC
ATTTCGCAGA GCGGCGCGCT GTGCACGGCG GTGCTCGATT TCGCGGCGGA CCGGGATTTC
GGGTTCTCCA AGTTCATTTC CATCGGCAAC AAGGCCGATG TGGACGAACT GGATCTGCTC
CGCTATTTCC ACAAGGACAA GGAAACGGAA GTGATCATGA TCTACCTCGA GGAGCTGCGG
CGCGGCGCCG ATTTCATCCA GGAGGTCCGG GAGATGACGT CGGGAGAGCG TCCCACGCCG
ATCCTGGTGA TCAAGTCGGG GCGCACGTCG GCGGGAGCCG CGGCCGCGGC CTCGCACACC
GGGTCGCTGG CGGGATCGGA AGGGATCTAC GAGGCCATCT TCCAGCAATC GGGGATCATT
CGCGCCGAGT CCATCGAGGA GCTGTTCAAT TTCGCCGAGG CGTTTTCCGG GAGGAAAATT
CCCAACGGCA AGCGGGTCGC CATCATCACC AACGCGGGTG GTCCGGGGAT CGTGGCCACC
GACATGACCG TCACGTCCGG CCTCAAGCTC GCCCGGCTGT CGGAGGAGAC CATCGAGACC
CTGGCCAGCC ATCTGCCTGC CACCGCCAAT GTGCACAACC CGGTGGACGT CATCGGGGAC
GCTTCCCAGG ACCGGTATGA AAACGCACTG GGGGCGGTTA TCCGGGATGC GAACGTGGAC
GGGGCGCTGG TGATCCTGAC CCCTCAATCC ATGACCAATG CACTGGGGAC GGCCGAAGCC
ATCGTGAAAA TCGCCAAGCG GTCTCAAAAG CCTATTCTGT GCTGTTTCAT GGGAATCATC
GACGTGTCGG CGGGGGTCAA GCACCTCCAG GAGAACGGCA TTCCCGTGTT TCGCTTCCCG
GAACACGCCG CCCAGGCGTT CGCGGCCCTG TACAGATACT CCAAGTGGAC CGGCCGACAA
CACCTGGCCC AGTTCGCCTT CCAGCACGAC GTCGAACGCG CCGCGGAAAT CATTCGCACG
AACCTATCCC GGGGAAGAAC GTACCTCGCG GATGCGGACG GCAATGAGAT CCTGCGCTGT
TACGGATTCC CCACCCTGCC GACATTCACG GCGAAGAGCC GTGAGGAGGC GCTCGATTAT
GCCGAAAGCA TGGGCGGGCC GGTGGCCATG AAGATCATAT CTCCCCAGAT CGTTCACAAG
ACGGATGCCG GCGGCGTCAT GATCGGCGTC AAGGGCCGTG AAGCCGTGAT AAAGGCTTAC
GACACGATCA TCGAAAACGC GACCGGGTTC GATCCGAATG CCGTGATCGA AGGGGTGCTG
GTGCAGCGGA TGGCGGAAAA GGGAGAAGAG GTTATTCTGG GCATGAGCCG TTTCCCGGGC
TATGGACCGC TGCTCATGTT CGGCCTGGGC GGGGTGCTCG TGGAAGTGTT CAAGGACGTC
GCGTTCCGGC TCGCCCCCAT CGGGCGCAAT GAAGCGCGGC GCCTGGTGAA AGGCATCAAG
GGACGCGTCA TCCTGAAGGG ATACCGGGGG AGACCGCCTT GCGATACCGG TTCCATCGAG
CGGTGTCTCG TGAGTCTGTC AGACCTGTCC ATGAACCATC CTGAAATCAA GGAGATGGAC
ATCAATCCGT TTATTGTCTA CGAAAAGGGC AAGGGAGCGG TGGCGGCGGA TTGCCGGATC
ATCCTCGAAC CGCCCGCCGC CGAAAAGGCA GCCCGTTAG
 
Protein sequence
MDKLDAIFAP KSVAVIGAST KPGKVGHDIF VNILKGNYQG TLYPVNPTAK SIQCVRAYPA 
ISDIPDPVDL GIIILPPPEA LKAVMESARV GIKGIVIVSA GFKEVGGEGR KIEEQITAIC
REAGMRLVGP NCLGVINPHP AVRLNASFSA RMPAFGEISF ISQSGALCTA VLDFAADRDF
GFSKFISIGN KADVDELDLL RYFHKDKETE VIMIYLEELR RGADFIQEVR EMTSGERPTP
ILVIKSGRTS AGAAAAASHT GSLAGSEGIY EAIFQQSGII RAESIEELFN FAEAFSGRKI
PNGKRVAIIT NAGGPGIVAT DMTVTSGLKL ARLSEETIET LASHLPATAN VHNPVDVIGD
ASQDRYENAL GAVIRDANVD GALVILTPQS MTNALGTAEA IVKIAKRSQK PILCCFMGII
DVSAGVKHLQ ENGIPVFRFP EHAAQAFAAL YRYSKWTGRQ HLAQFAFQHD VERAAEIIRT
NLSRGRTYLA DADGNEILRC YGFPTLPTFT AKSREEALDY AESMGGPVAM KIISPQIVHK
TDAGGVMIGV KGREAVIKAY DTIIENATGF DPNAVIEGVL VQRMAEKGEE VILGMSRFPG
YGPLLMFGLG GVLVEVFKDV AFRLAPIGRN EARRLVKGIK GRVILKGYRG RPPCDTGSIE
RCLVSLSDLS MNHPEIKEMD INPFIVYEKG KGAVAADCRI ILEPPAAEKA AR