| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1962 |
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| Symbol | |
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| ID | 4459733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 2398924 |
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| End bp | 2399913 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639702730 |
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| Product | signal peptide peptidase SppA, 36K type |
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| Protein accession | YP_846082 |
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| Protein GI | 116749395 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0118482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCT ACGCCCTTTC GACAATCGTC GTGATGATCG CGCTCCTGGC GACCGGCTGC
ATCAAACCCA AAATCACGGT CTTCCCGGAT GCGACCGAAC CCTTGCTGGA ACACACTCTG
CAGGGCGAGG GCAAGGACAA GGTCCTGCTG ATCCCGGTCA AGGGATTCAT CTCGGACACG
TCTCGAGGGT TCGTTCTGCG TCAAAAACCG GCCATGGTGC AGGAGATCGT TTCGCAGCTC
AAGAAGGCGG AGAAGGACAA GACCGTCAAG GCGGTGCTGC TCAAGGTGGA CTCGTCGGGC
GGGTCCGTGA GTGCAAGCGA CATCCTCTAC CACGAAATCA TGGAGTTCAA GCGCCGCAGC
GGGGCGAAGC TCGTGGCGGT GCTGATGGGG ACGGCGGCAT CCGGCGGGTA TTACATCGCT
CTGCCCGCGG ATAGCATCGT GGCTCATCCG AGCACGATCA CCGGATCGGT GGGCGTCATT
TTCATCAGGC CGAAAGTCAC CGGGCTGATG GACAAGATCG GCCTCGAGGT CGAGGTGGAC
AAGTCCGGCA GGAACAAGGA CATGGGATCC CCCTTCCGAA AAACCACGGC GGAGGAGCAG
CAAATCCTGC AACACCTGAT CGATGAACTG GCGAGGAAAT TCATTGACCT CACGGTGGCT
CACCGCAGGC TCGAGCCGGC CGCCCTGGCC GACGTCTCCA CGGCGCGCGT CTATCTCGCC
GAAGAGGCTC TTCGCCTGGG ACTGGTGGAC AAGGTGGGAT ACGTCGACGA TGCTTTGCGA
GAGGCGCAGA CCCTCGCCGG CCTGCCTCCG AACGCCAGGG TGGTCGTCTA CCGGCGGGCC
GAATACCCCG ACGACAACCT GTACAACGTT TCCACGAGCA AATCCGACGG CGGCAGAATC
AGCCTCATCG ATCTCGGGCC GGCGGATTCC TTCTCGTCGC TTCACAGCGG CTTCTATTAC
CTCTGGCTCC CCGGAGCGGG CGGCGAATAA
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| Protein sequence | MTRYALSTIV VMIALLATGC IKPKITVFPD ATEPLLEHTL QGEGKDKVLL IPVKGFISDT
SRGFVLRQKP AMVQEIVSQL KKAEKDKTVK AVLLKVDSSG GSVSASDILY HEIMEFKRRS
GAKLVAVLMG TAASGGYYIA LPADSIVAHP STITGSVGVI FIRPKVTGLM DKIGLEVEVD
KSGRNKDMGS PFRKTTAEEQ QILQHLIDEL ARKFIDLTVA HRRLEPAALA DVSTARVYLA
EEALRLGLVD KVGYVDDALR EAQTLAGLPP NARVVVYRRA EYPDDNLYNV STSKSDGGRI
SLIDLGPADS FSSLHSGFYY LWLPGAGGE
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