| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1945 |
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| Symbol | |
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| ID | 4459750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 2374731 |
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| End bp | 2376548 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639702713 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_846065 |
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| Protein GI | 116749378 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.312246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGAACC TCATCGGGGT CGGTTCCGCG GATTCCGGGA CCACCACGTA CGGGTACCGG
GCGGAAGGGA CCCTGGTGTG GAGGATCGAT GCACGAGGCA TCCGCACGGA CTACACCAGC
GACCTTCTCT ACCGGATCAA GGAGGCGAGC TACCCGGCCG TGGGGGATCT TGGCGCCTAC
ACGGTGAGCT ACACCTACGA CCAGCGCGCA AACGGCAAGG GGCATCCGAC CACCGTCACG
GATCCTTCCG GCACTACCCT CTTGAACTAC GACGCCAGGG GAAGGCTCAA GGAGAAGAAA
TCCACCGTTT CGGGGTTTCA ATTCACCCTC TCGCGCACGT TTTCCCCCGC GGGCCGAGTG
AACCAGCTGA CCTATCCGAG CGGCAGGACG GTGACCTACA GCCGCGCGGG TTGCGGATGC
AAGCTCACCG GGGTGAGCAC GACCTACGGG GCCGAATCGG CCACGACCAT CCTCGAGAAC
CTCACCTACC AGCCTTTCGG CCAGGCCACC GGCATGGGCT GGGGAAACGC CGGGAGCGTG
GTGAGCGAAT ACGATCTCAA CGGGCGTCTC ACCGCGGCAA ATCGCGGCGC CTCCATGCAG
CGCGACTTCA CCTACTACCC CAACGGGCAG CTTCACACGA TCGCGGGCAC GGCCTCCACT
CCGTGGGTGA ACCGCGTCTA CGCCTACGAC ACCTTGGACC GGCTGAGCCT TGCCGAGCGC
CCGCAGCTGA CAAAAGCCTA CGACTTCGAC TCCGCGGAAA ACCAGCTTCA CACCATCGTT
GACGCCTCGG TGAGCGAAAC TTACGCCTAC GCTGCCGGAA CGAACCGCCT GAGCGCCGTC
GCGACCGCGC AAGGCAAAAC CTTCGACTAT GACGCCAACG GGAACACGAT CCTTATCGCC
TCGGGAACGA ACCGGGTTTT CACCTACAAC CAGGAAAACC GTTTGATCGG AGTCTCCGAA
GACGGAAACC CCTTAGGCAC CTACGTCTAC AACGGGTTCG CCCAGAGGGC GGCAAAGACG
GCGGGAGGGG TCGCGACGCT CTATCTCTAC GATTTTAGCG GGAACCTCGT CTGCGAGGCC
GAGGGAACCG GCGGCGGCAT TCAAAAGGAG TACATCCACC ACGGAAGGAG CCGCCTTGCG
ATGGCCGATC CCGGCGCCGG GGCCGTTTGT TCGGGGAACA CCAAGGTGTG CGTGTACTTC
ACTCACAACG ACCTCCTGGG AACGCCCGAG CTCATGACCG ATTCCACCAA CACCGCGGTC
TGGGAAGCCG CCTACGACGG CTTCGGCGAA GCGACGATCC ATCCCGCCTC CACCGTCGTC
AACAACTTCC GCTTCCCGGG TCAGTACTAC GATGCCGAGA CGGGCTTGCA TTACAACCGG
CACCGGTACT ATGATCCAAA AACCGGGAGG TACATGACCC CTGACCCGAT AGGATTAGCA
GGCGGGATCA ATCCGTATGT TTACACGGAG AATGATCCTA TCAACAAGAT CGATCTGGCA
GGTGAGAACA CCATTGCGAT CGGTGCTGGG GCTGGCAGCT TTATTGGTGG TCCCCCAGGA
GCAGTTATCG GTGCGGCCAT TGGTGCAGGG ATTGGTGTGG CCGCAGGATA TGCCATATCG
GAGCCATGTA AAGAAGATGA CCTCGAACGA AAGTGTGAAG AAAATTTGAC AAGGGACTTG
GCCACCTGTT CAGCGCTTGG CAAGAGAGAT GGAAAAACAG CGTATGCAAT ATGTGAACGT
CAAGCGTACG CACGTTATGC CCGTTGCTTA CAGGGAAGCG ATATAACGCC ACCACTCCCA
CCATGGGGTA CAAAATGA
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| Protein sequence | MGNLIGVGSA DSGTTTYGYR AEGTLVWRID ARGIRTDYTS DLLYRIKEAS YPAVGDLGAY
TVSYTYDQRA NGKGHPTTVT DPSGTTLLNY DARGRLKEKK STVSGFQFTL SRTFSPAGRV
NQLTYPSGRT VTYSRAGCGC KLTGVSTTYG AESATTILEN LTYQPFGQAT GMGWGNAGSV
VSEYDLNGRL TAANRGASMQ RDFTYYPNGQ LHTIAGTAST PWVNRVYAYD TLDRLSLAER
PQLTKAYDFD SAENQLHTIV DASVSETYAY AAGTNRLSAV ATAQGKTFDY DANGNTILIA
SGTNRVFTYN QENRLIGVSE DGNPLGTYVY NGFAQRAAKT AGGVATLYLY DFSGNLVCEA
EGTGGGIQKE YIHHGRSRLA MADPGAGAVC SGNTKVCVYF THNDLLGTPE LMTDSTNTAV
WEAAYDGFGE ATIHPASTVV NNFRFPGQYY DAETGLHYNR HRYYDPKTGR YMTPDPIGLA
GGINPYVYTE NDPINKIDLA GENTIAIGAG AGSFIGGPPG AVIGAAIGAG IGVAAGYAIS
EPCKEDDLER KCEENLTRDL ATCSALGKRD GKTAYAICER QAYARYARCL QGSDITPPLP
PWGTK
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