Gene Sfum_1940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1940 
Symbol 
ID4459745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2368235 
End bp2368771 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content62% 
IMG OID639702708 
ProductNADH dehydrogenase subunit I 
Protein accessionYP_846060 
Protein GI116749373 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID[TIGR01971] NADH-quinone oxidoreductase, chain I 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.509162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCGG CATGGGAAGC GGTCAGAGCG CTTGCATCGG GATTCGCCAC TACGTTCGTG 
CACCTTTTTC GCAAGCCGGT GACCGAGGAA TACCCGGAGG TCAAACGCGC TCTGCCCGCC
CGGACGCGCG CGGTGATCGT TCTGACGCGC GACCCGGACG GCGGCGAACG GTGCGTGGCG
TGCTATCTGT GTTCGGCGGT CTGCCCGGTG AGCTGCATTT CCATGCAGGC CGCGGAAAGG
GAGGACGGGC GCCGCCACGC GGCCTGGTTC CGGATCAATT TCGCGCGCTG TATCTATTGC
GGGCTTTGCG AGGAAGCCTG TCCGACCTCG GCGATTCAAC TCACCCCCTT TTTCGAAACG
TGCGAACGGG ACATTCTGAA GCTCGTGTAC GAGAAGGAGG ACCTGCTGGT GGACCACCAG
GGGAAGGACA AGGAGTACAA CTTCTACAAA TACGCCGGCG TGACCACGGA TGTGGGCGGC
AAGGGAGAAC ACGTCCAGGA GGATGAGCCG GTGGACCTCC GGAGCAATCT TCCGTAA
 
Protein sequence
MSSAWEAVRA LASGFATTFV HLFRKPVTEE YPEVKRALPA RTRAVIVLTR DPDGGERCVA 
CYLCSAVCPV SCISMQAAER EDGRRHAAWF RINFARCIYC GLCEEACPTS AIQLTPFFET
CERDILKLVY EKEDLLVDHQ GKDKEYNFYK YAGVTTDVGG KGEHVQEDEP VDLRSNLP