Gene Sfum_1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1939 
Symbol 
ID4459744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2367601 
End bp2368119 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content58% 
IMG OID639702707 
ProductNADH-ubiquinone/plastoquinone oxidoreductase, chain 6 
Protein accessionYP_846059 
Protein GI116749372 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.507112 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTTT ATGCGTTTCT CTTCTATATC GTGGCGGGGA TCACCGTCGC ATCGACGGCG 
ATGGCCATCA CCCGCCGAAA CCTGGTGCAC GCGGTGATCT ACCTGATCTT CTCCTACTTC
GGCACCGCCG TGCTCTTCTA TCTCTTCGGA GCGCCGCTCC TGGCGGCCTT CGAAGTGATC
ATCTACGCGG GCGCGATCAT GGTCCTGTTT CTTTTCATCG TCATGATGAT CCGGATCGAA
TCGTACGGGG AGCTCATGTT CCCTCCCGGC CAGTGGCTGC CCGCCGCCGT TTTCGGCCTC
GTTTACCTCG TGGTCGGAAT TCTCATGATA TCGGCGACCC CGGGGACCGA AATCCCGTTG
CAGACGGTTC TGGCCACCCC CCGGGAGTTT GCCCGGTATG TTTTTCAGAA TCACTGGCTT
TCCGTCGAGA TCGTGTCCCT GCTGTTGCTG GTGGCCCTGG TGGGAGCCCT TCACCTGGGA
AGACACAAAG GAAGAAACGA AGTCGAGGAA GTGGAATGA
 
Protein sequence
MTLYAFLFYI VAGITVASTA MAITRRNLVH AVIYLIFSYF GTAVLFYLFG APLLAAFEVI 
IYAGAIMVLF LFIVMMIRIE SYGELMFPPG QWLPAAVFGL VYLVVGILMI SATPGTEIPL
QTVLATPREF ARYVFQNHWL SVEIVSLLLL VALVGALHLG RHKGRNEVEE VE