| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1937 |
|---|
| Symbol | |
|---|
| ID | 4459742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 2365350 |
|---|
| End bp | 2367263 |
|---|
| Gene Length | 1914 bp |
|---|
| Protein Length | 637 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639702705 |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
|---|
| Protein accession | YP_846057 |
|---|
| Protein GI | 116749370 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
|---|
| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.34876 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.241248 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCCT TCCAGCCCGA GGACATGACG CTCACGACGG CCGTGCTCAC AACCGTGGCG
CCTTTCGTCT CCTTTGTCCT CATCATGCTC TTGACCCGGT CGCGTCCGCG GCTGTCCGCC
GGTCTGTCCA TCGGGGCCGT CACGGTTTCC CTGGTCGGCG CCGTTGTTCT GCTGTGCCTT
CACTGGCACA CCGGAAAACC GGTTCAATAC ACCACCCGGT GGATGATTTC CGGCGATACG
GGCATCCCCG TGGGATATCT GCTCGATCCC GTCAGCCTGC TCATGCTCCT GGTCGTGGCG
GCGGTGAGTT TTCTGATCCA GGTGTACTCT CTAGGATACA TGGCCGGCGA CACGGGTTTT
TCGCGCTATT TCGCCTTCAT GTCGCTCTTC GTCTGGGCGA TGATGTGCCT GGTCATTGCT
CCGACCCTGT TCCAGCTCTA CGTGTTCTGG GAACTGGTCG GACTGTCGTC TTACCTCCTG
ATCGGTTTCT GGTACCGGAA ATTCAGCGCC AGCCAGGCGG GCAAGAAAGC CTTCGTGATG
ACGCGAGCGG GGGATGTGGC GCTGTTTATC GGCATGTTGC TCGTCCTGCT GCACCTGGGC
AACCTCAACA TCCTGGAAAT CGACGGTCCG GAGATGGCGC AGCGCATGCC TCCGAACCTC
CTCACGCTTT CCGCCGTCCT CATCTTTGGC GGGATCATCG GAAAAAGCGC GCAGTTCCCG
CTGATGACCT GGCTGCCGGA CGCCATGGAA GGTCCGGCCC CGGTGAGTGC CCTGCTGCAT
TCCTCCACCA TGGTGGCCGC GGGGGTTTAC CTTTTCGAAA GACTTTTCCC GTTCTTCCTG
CTGTCCCCCG TCGCCATGAC CGTCGGTCTG ACCATCGGCA CCGTCAGCAT GCTGCTGGCT
TCCACCATGG CCATGGTGAG CCGGGACATC AAGCAGATAT GGGCCTACTC CACGATCAGC
CAGCTGGGTT TCATGATCAT GGGCCTGGAT GCCGGGAGCC TTTTTTCCGG CGTCTTTCAC
CTGACGACCC ACGCCGGATT CAAGGCGCTG CTGTTCCTTT GCGCCGGGGT GTTCATCCAC
AGGCACCAGA CCAACGATAT TTTTGAATTG AGCCGCCTGG GCGTGCGGAG TCTCAAGGCG
CCCATGGTCT GCACCGTCAT CGCCGTTGGG TCGCTTGCCG GCCTCCCCCC GCTTTCCGGG
TTTTTCAGCA AGGAGGTGAT CCTTGCGGGA CTGGGCGATC TTGCCAATCC CATGTGGCTT
ACGGCGGCAC TCCTGGGCGT GTTCCTGACC GCCTACTACG GTTTCCGGCT GGTCTTCATC
CTTCTTTTTC CACGGGAGCC GGCGGAGCGT GCCGGGCAAA ACGAAGGCGA CCGCGGATCG
GAAGCGGAGC ACGGTCACGG CGGGACCGCT CACTGGTTGA TGACCTGGCC GCTGATCCTC
CTTGCCGCCG CCACGGTGCT GCTGGGCTTT CTTGAAAAGC CGCTGGAGCG TTTCCTGCTG
GGGGGATCGG CACCGCCGGG GATTCATTCC TCAGGCTACC TTGCCCTCGT GCCCTACATC
GCCTTGGCTC TCGCATTGGC GGGGATCGGC CTGGCGTGGG TGGAATTCGG CCGGCGCTCC
GCTCCCCGGG TGGGATTCGT GGAGCGCGTT CCGGCGCTGC ACAGGCTGTT TGCCGAACGC
TGGTACATCG ACCATTTCTA CCGCCTGGCG CTCGACCGGC TGATCGACCG GGGGATTGCG
CGCCTGTTCC AGGACAATGA CGACAAGGTG ATCGACGGCG GCATCGACGG CGTGTGCAGG
GGCACGGTGT TTGGGGGCCG GCTGGCGTCC GCCCTCCAGT CGGGCATGAT CCAGTACCGG
TTGCTGGCGA CGTTTGTGGT CATGGTGATG TTGGCGGTTT ACTTTTTCCT GTAA
|
|---|
| Protein sequence | MSPFQPEDMT LTTAVLTTVA PFVSFVLIML LTRSRPRLSA GLSIGAVTVS LVGAVVLLCL
HWHTGKPVQY TTRWMISGDT GIPVGYLLDP VSLLMLLVVA AVSFLIQVYS LGYMAGDTGF
SRYFAFMSLF VWAMMCLVIA PTLFQLYVFW ELVGLSSYLL IGFWYRKFSA SQAGKKAFVM
TRAGDVALFI GMLLVLLHLG NLNILEIDGP EMAQRMPPNL LTLSAVLIFG GIIGKSAQFP
LMTWLPDAME GPAPVSALLH SSTMVAAGVY LFERLFPFFL LSPVAMTVGL TIGTVSMLLA
STMAMVSRDI KQIWAYSTIS QLGFMIMGLD AGSLFSGVFH LTTHAGFKAL LFLCAGVFIH
RHQTNDIFEL SRLGVRSLKA PMVCTVIAVG SLAGLPPLSG FFSKEVILAG LGDLANPMWL
TAALLGVFLT AYYGFRLVFI LLFPREPAER AGQNEGDRGS EAEHGHGGTA HWLMTWPLIL
LAAATVLLGF LEKPLERFLL GGSAPPGIHS SGYLALVPYI ALALALAGIG LAWVEFGRRS
APRVGFVERV PALHRLFAER WYIDHFYRLA LDRLIDRGIA RLFQDNDDKV IDGGIDGVCR
GTVFGGRLAS ALQSGMIQYR LLATFVVMVM LAVYFFL
|
|---|
| |