Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1933 |
Symbol | |
ID | 4459770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 2357259 |
End bp | 2359484 |
Gene Length | 2226 bp |
Protein Length | 741 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639702700 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_846053 |
Protein GI | 116749366 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.820438 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.142567 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCCA GTCAGGGACC ACCGGATAAA ACCAGCAGGC GCCGTACCCG GGAACGCATC CTGGTGATTG CCGTGTTTGC GGCGATCATC ACGGTCGGAT TCTTCGAGGG CTGGTTTTTC CGGCTGCAAT CGGACCTGCC CCTGTCCGGG AATATCCTGC TGTTCGCCTT CATCAACATC AACGTCATCC TGCTTTTGCT GCTCGCGTAC CTGGTTTTGA GAAACATCGT CAAGCTGGTT TTCGAACGCA AGCGCAATAT CCTCGGGCAC AAGTTGAGGA CCCGGCTGGT GATCGCATCC GTGGGACTGA CGCTCATCCC CACGATACCG CTGTTCTGGC TGGCGACGCA GTTCATCTTC TCCAGCCTTG ACCAATGGTT CAGCTACCAG GTGGAGCAGT CGCTCGAGCA GGCGGTGGGA CTGGGAAAGA ACGTCCTGGA ACGGGAAGGA GCCGACCTGG TCACCGATGC CCGGTCGATC AAAGCCGAGG TATTGAAGCT CGACGAAGAG GAAAGACCTG CGCCCGCGGC ACTGGAGCGC ATCTCTTCCT CTTACATGGG ACAGTACCGC ATCGACGGGC TTTTTCTCTT CGACGGTTCC GGCCGCCTGA CCTGGAAGAC GGTCTCCCCG GAGCTCGGCG AAATCGAACC CGGGGCCCTC CGGAAACTGC TTGAAAAGGA ATCCGAACAG ACGGCCAGGA GCTACACCCT GAGCTCCGAG GCAAAACGCG AGGGACTGGC CGCTCACGTG TTCTTCCCGC GCGGGAGCGG TCCCACCGGC GAGGGGAGCG AGTTGATCGC GTTCCGGCTT CTTCCTCCCC ACATCATGGA AAAACTCGGC ACCATCACCG GCGGCTACGA AGATTACCTG CAACTCAAGC TTCTGCACTT TCCTTTGAAG CAGAGCCATT TCATCACTTT TTCCATCGTT ACGCTGCTCA CCATCTTCGC CGCCATCTGG TTCGGTTTCT TCATTGCCAG GAGCCTCACC GTGCCCATCC AGGCCCTGGT TTCCGCCACT CAACGCATCG CCGAAGGCGA CCTGGAGGTT CATCTCGAAT CCCAGCGCCA GGATGAGCTG GGCATGCTGA TCACTTCCTT CAACGACATG GTGGAGGACC TGCGCGAGAG CCGGGGGAAG CTGGCCAACG CTTATCTGGC CTTACAGCAA AGCCACCTGG AGCTGGAGAA CCGGCGGCGG TACATGGAAG TCGTGCTGAA GAACATCGCC GCGGGCGTGG TCAGCGTGGA CGCCGGGGGA CGGATCATGA CGATGAACAA GGCGGCCGAG GAAACGTTCG GGCTGCATGC GGACCGGGTG AAAGGGCTGC ATTACTCAAG CTTCCTGCGG CCCGCGCACC TGGAGATCGT CAAGTCCTTC ACGGAAATGT ACGAATCCAC CCGGCAGCCG TACCTGGAAC AGCAGGTCCA GGTCGTGGTG GGCGAGCAGC CGATGACCCT GCTCATCAAC GCCTCGGTGC TCAAGGACGA GAAGAACGAG TTCATGGGGG TGGTGGCCGT GCTGGACGAT CTGACCGAGC TGGAGAAAGC CCAGCGCATG GCCGCCTGGC GGGAGGTGGC GCGGCGCATC GCCCACGAGA TCAAGAACCC GCTCACCCCC ATTCAGCTGT CGGCCCAGCG GCTGCGCCGC AAGCACCCGG AGCTGCTCGA GGAGGCGGAC TCGGTCTTCG ATGAATGCAC GCGCACCATC ATTCAACAGG TCGATCACAT GAAGCACCTG GTCAACGAGT TTTCGAAGTT CGCGCGCCTG CCCCGCGCCC GCCCGGTGCC GAGCGATCTG TGCGCCATCA TCGAGGAGAG CCTGGCCCTG TACCGTCATA CGTATCCGAA CATTTCCTTC GTTCTCGAGA AGATGGACGA CCTCCCGCCG CTCAGGCTCG ATCGGGATCA ATTCCGACAG GTTATGATCA ACCTCATCGA GAACGCCGTC TACGCGATCG GCAGGGAGAA GGGCGTCATC ACCAACCGGG TCTCCTACGA CCCGGTCCTC AATATCGCGC GGATGGAATG CGCGGACACC GGCCGCGGGA TATCGCCCGA AGGCAAGTTG CGCATGTTCG AACCGTACTA TTCCACGCGT CGGAAGGGCA CCGGGCTGGG GCTGGCCATC GTCGCCAGCA TCATTGCCGA TCACAACGGG TTCGTGAGGG TCCGGGACAA CGTGCCGGCC GGCACGGTGA TCGTCATAGA ACTGCCCGGG CGATGA
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Protein sequence | MNSSQGPPDK TSRRRTRERI LVIAVFAAII TVGFFEGWFF RLQSDLPLSG NILLFAFINI NVILLLLLAY LVLRNIVKLV FERKRNILGH KLRTRLVIAS VGLTLIPTIP LFWLATQFIF SSLDQWFSYQ VEQSLEQAVG LGKNVLEREG ADLVTDARSI KAEVLKLDEE ERPAPAALER ISSSYMGQYR IDGLFLFDGS GRLTWKTVSP ELGEIEPGAL RKLLEKESEQ TARSYTLSSE AKREGLAAHV FFPRGSGPTG EGSELIAFRL LPPHIMEKLG TITGGYEDYL QLKLLHFPLK QSHFITFSIV TLLTIFAAIW FGFFIARSLT VPIQALVSAT QRIAEGDLEV HLESQRQDEL GMLITSFNDM VEDLRESRGK LANAYLALQQ SHLELENRRR YMEVVLKNIA AGVVSVDAGG RIMTMNKAAE ETFGLHADRV KGLHYSSFLR PAHLEIVKSF TEMYESTRQP YLEQQVQVVV GEQPMTLLIN ASVLKDEKNE FMGVVAVLDD LTELEKAQRM AAWREVARRI AHEIKNPLTP IQLSAQRLRR KHPELLEEAD SVFDECTRTI IQQVDHMKHL VNEFSKFARL PRARPVPSDL CAIIEESLAL YRHTYPNISF VLEKMDDLPP LRLDRDQFRQ VMINLIENAV YAIGREKGVI TNRVSYDPVL NIARMECADT GRGISPEGKL RMFEPYYSTR RKGTGLGLAI VASIIADHNG FVRVRDNVPA GTVIVIELPG R
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