Gene Sfum_1929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1929 
Symbol 
ID4459766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2352830 
End bp2353378 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content61% 
IMG OID639702696 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_846049 
Protein GI116749362 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000963233 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00946276 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGAGTTC TGCCGTACAG GAACGTCATG CCCAGGCTCG CGGAAGACGT GTTCGTCGCC 
CCGGGAGCGT GGGTGATCGG AAACGTTGAG ATAGCGGCTC GCAGCAGCGT CTGGTTCAAT
ACGGTCATTC GCGGCGACGT CCACACCATT CGAATCGGGT CTGAGACCAA CATCCAGGAC
AACTGCTCTT TGCACGTGAC GGAGCCGGAT TTTCCGCTGG AAATCGGAAA CCGGGTCACC
GTCGGCCACC GGGCCATCGT CCACGGATGC GTCGTCGAAG ACGACTGCCT TATCGGCATG
GGGGTGATCA TCCTCGATGG AGCGAAAATA GGACGGGGAT CGGTCATCGC CGCCGGAGCG
CTGATCACCC CGGGGTTTGT CGTTCCACCG AAGTCGCTGG TGATGGGTTC TCCCGCGCAG
GTCAAGCGGC CGATCACGGA CGAAGAATTC CAGCGCGCGC AGAAGAGCTA TTTCCACTAC
ATCGATCTGG CCTCCGACTA CCGGGACCCG GGCAGGGAAG GAATTCGGAT CAAGGGGTTC
CTGGGATAG
 
Protein sequence
MGVLPYRNVM PRLAEDVFVA PGAWVIGNVE IAARSSVWFN TVIRGDVHTI RIGSETNIQD 
NCSLHVTEPD FPLEIGNRVT VGHRAIVHGC VVEDDCLIGM GVIILDGAKI GRGSVIAAGA
LITPGFVVPP KSLVMGSPAQ VKRPITDEEF QRAQKSYFHY IDLASDYRDP GREGIRIKGF
LG