Gene Sfum_1924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1924 
Symbol 
ID4459761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2346243 
End bp2347523 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content60% 
IMG OID639702691 
Producthypothetical protein 
Protein accessionYP_846044 
Protein GI116749357 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00311974 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGTCGTCTC ATCTTCAGCA AAGACCGGGC TATGCAAGGA TAACGGAAGA ATCCGATCTC 
TCCCTGGAAA TTGTCATCCT GCTCGTCCTG GGTGTCTTCA TGGTCCTTTT CGGCCTGCTG
CTGTTCAAGA TTCACACCGG GGAACTGCCG TACAACCCCG ACGGAACCTA CGGGCTCTTC
CTGGTCATCG TCTCCTTTCA GACGATCACG ATGGGGAAGA CGCCGTTCGG CGATCTGCGC
CGGTCCCGGG CGCTCATAAT GACGGGGATC TGCACGGCGG TCCTCGGGAT GACCGCCTGT
TTCATTCCGG GCACCCTTAC CGGGCTTGTC CGCATGCTGG TTGGAACGGT GCTTCTTGCC
GGCGGGACGG TCCTTCTCGC GCAGCTGTTC TTTTCCGAGG AGAAGGCGAG GACCTGGATG
AGAATCGCGG GAATATTGCG GCAGCTGACC GTAGCCTGCG GCGTCGTCTA TGCAATGACG
GTCGTTCAAG GCCTGATCAC GCTTTTCCCC GGCTTCACGA CCGATCGGCA GACCGCGGTG
CTTCTCATCG GCTACGGGGC TGGTTTTTTC TACCTGTCGT GGTGCATTCG AAAGGCTGCA
CAAGCGTATC CTCCCGAAGA TTCGCCGGAT GGCGCATCGA GTGCGCCGAA TCCGGACAAT
GCCGGTTCAA CAAGGTGCTT CGGGCTGTTC CGGGATGCTT CCCTTTCCCT TATGCCGGCG
ATACTGATCC TGCTGGGAAT CCTCCTGACA CTTCTCGGAC TGCTCCTCTT CCCGGTGAAT
ATCGGCCTGC TTCCGTTCTC GCCGGACGGA CAGCTCGGCG TTCTGCTGAC CCTCACGGCC
ATCCAGATGA TGGCCCTGGG AGACACCCCT TTGGGCCGGT ACAGGCGCTC GTCGCTGATG
ATACTGACGG GGCTCGTGTT TGCCGCGTTG GGGATCGTCT CGTGTATCGT TCCGGGCATG
CTGACCGGAA TGATTCAGAC ATTCCTCGGG CTTGTGAACA TCATCGGCGG GGCCTCGGCA
CTCGTCAGGC GGTATGCCCC GATGCCGCAC GCGAGCAGAG CCCCCGCGGC GGCGCCTTCC
CCGGTTCCCC CCACCGTCAG GAAACTGATG CTGACTCAGA CGGTACTCAA TCTCGTGACG
ATGGTCTTCG GGGTATCCAT GCTCGTACCG AGCCTCGTTT CAGGCCTGGT TGTCGCCGGA
ATTCTCGTCG TCAACGGCCT GCTTCTCTTC GCGCTGGCGT CCCTCCTCCA GGAGTTGACC
CGGATGCAGG CAAGCGGTTG A
 
Protein sequence
MSSHLQQRPG YARITEESDL SLEIVILLVL GVFMVLFGLL LFKIHTGELP YNPDGTYGLF 
LVIVSFQTIT MGKTPFGDLR RSRALIMTGI CTAVLGMTAC FIPGTLTGLV RMLVGTVLLA
GGTVLLAQLF FSEEKARTWM RIAGILRQLT VACGVVYAMT VVQGLITLFP GFTTDRQTAV
LLIGYGAGFF YLSWCIRKAA QAYPPEDSPD GASSAPNPDN AGSTRCFGLF RDASLSLMPA
ILILLGILLT LLGLLLFPVN IGLLPFSPDG QLGVLLTLTA IQMMALGDTP LGRYRRSSLM
ILTGLVFAAL GIVSCIVPGM LTGMIQTFLG LVNIIGGASA LVRRYAPMPH ASRAPAAAPS
PVPPTVRKLM LTQTVLNLVT MVFGVSMLVP SLVSGLVVAG ILVVNGLLLF ALASLLQELT
RMQASG