| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1921 |
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| Symbol | |
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| ID | 4459758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 2341839 |
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| End bp | 2342975 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639702688 |
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| Product | carboxynorspermidine decarboxylase |
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| Protein accession | YP_846041 |
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| Protein GI | 116749354 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01047] carboxynorspermidine decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.380806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00337134 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACCTTCG ATCTTTCGAA CATCGAAACC CCTTGTTACG TTGTCGACGA AGCGGCCCTG
GACCGCAACC TGGCCGTGCT CGACACGGTT CGGCAGCGCA CCGGGTGCCG CATCCTCATG
GCGCTCAAAG GGTTTGCCAT GTTCAGCCTC TTCCCGCAAA TCCGGGAAGT TCTGGCAGGC
GTTGCGGCCA GTTCGCCGGA CGAGGCGCGC CTGGGATTCG AGGAATTCCG CGGTGAGGTC
CACGCCTACG CCCCCGCTTA CCGGGAATCC GAGCTCACGG AGCTCCTGGA GTACTGCGAT
CACCTGGTGT TCAATTCCTT TTCCCAGTGG AACCGTTTCA AGTCCCGGGT GTTCGATCAC
CCGGCCCCCG TCCGGTGCGG GATCCGCGTG AATCCGGAAC ACTCCGAAGT GAGCGTCCCG
ATCTACGATC CGTGTGCCCG CTTCTCGAGG CTCGGGGTCC CACGGAGCGC CTTTCGCGAG
GAAGACCTGG ACGGCATCAG CGGTCTGCAT TTTCACACGT TGTGCGAGCT CGACGCGGAT
TCCCTGGAGC GGACTCTGGC GGCGTTCGAA ACCCGGTTCG GAGCTTTCCT GGAAAGGATG
GAGTGGGTGA ACTTCGGCGG CGGACACCAC ATCACGCGCC CCGACTACGA CGTCGACCTG
CTCTGTCGGC TGATCGACGA TTTCAGAAGC CGCCATCCCC TGGAAATCTA CCTGGAACCC
GGGGAGGCCG TCGCACTCAA CACCGGGATT CTTGGCGCAT CGGTCCTTGA TCTCATTCAC
AATGAAATGG ACATCGCCAT CCTCGACACC TCGGCCGCGG CCCACATGCC CGACGTTCTG
GAAATGCCCT ACCGCCCGGA AATCGATGGC GCGGGCATGC CGGGAGAATA CCCTCACACC
TACCGCCTGG GCGGGCTCAC CTGCCTCGCC GGCGACGTCA TCGGCGACTA CTCCTTTCCC
GAGCCGCTCC GGATCGGCTC AAAGCTTGCC TTCCTCGACA TGGCCCACTA CACCATGGTG
AAAAACAACA CCTTCAACGG AGTGCGCCTC CCTTCCATCG CCATCCGTGA CCGGAGGGGA
AACGTACGCG TCGTGCGCAA ATTCGGCTAC GAAGACTACC GTAACCGGTT GTCGTGA
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| Protein sequence | MTFDLSNIET PCYVVDEAAL DRNLAVLDTV RQRTGCRILM ALKGFAMFSL FPQIREVLAG
VAASSPDEAR LGFEEFRGEV HAYAPAYRES ELTELLEYCD HLVFNSFSQW NRFKSRVFDH
PAPVRCGIRV NPEHSEVSVP IYDPCARFSR LGVPRSAFRE EDLDGISGLH FHTLCELDAD
SLERTLAAFE TRFGAFLERM EWVNFGGGHH ITRPDYDVDL LCRLIDDFRS RHPLEIYLEP
GEAVALNTGI LGASVLDLIH NEMDIAILDT SAAAHMPDVL EMPYRPEIDG AGMPGEYPHT
YRLGGLTCLA GDVIGDYSFP EPLRIGSKLA FLDMAHYTMV KNNTFNGVRL PSIAIRDRRG
NVRVVRKFGY EDYRNRLS
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