Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1920 |
Symbol | |
ID | 4459757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 2340832 |
End bp | 2341860 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639702687 |
Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
Protein accession | YP_846040 |
Protein GI | 116749353 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.215161 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00355923 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAACGACA CAACGGCAAA GACTCTCAAT TGCTCCCCGG CCTCCCGCGA CGGGTTCCCG GAGACGCTCG GCGACTTCGG GCGCACGCGC GTCGACCTTC CCGTCGTCCT CGTGGCGGGC CCCACCGGAG TGGGCAAGAC CGCGTTCGCC GTCGAGCTCG CCCGCGCCCT GGGCTCCGAG ATCGTCAACG CCGACTCCAT GCAGGTCTAT CGGCACATGG ACATCGGCAC CGCCAAGCCC ACCCCGCGGG AACGCTCGGC CGTTCCACAC CACCTGATCG ACATCGTCGA CCCCGATGAA CCCTTCGATG CGGGCGACTA CCTGGCCCGG GCAAGACCCG TCATCGCGAC CCTGCACGAG GCGGGCAAGG TCCCCATCGT CGTCGGCGGC ACGGGGCTCT ACCTCAAGGT TCTCACGCGC GGCATCTGCG CGGGCGCTCC CGGCGATCCC GACGTGCGCC GACGGCTGAT CGAGGAGGAA CTGACCCTCG GGCTTCCCGC TCTCCACGAG CGGCTGCGCG ACGTGGACCC GCCGCTCGGC GCCCGCATCC ACCCCAACGA CCGCCAGCGC ATCCTCCGGG CGCTCGAAGT CTTTCACCAT TCCGGCAAGC CGCTCTCTTA CTGGCAGCGG CAACACCGCT TCGAAGACGC TCCGTACCGG ACGCTCAAGA TTTTCCTCCA CCGGCCGCGG GAAGTACTCT ACGCGCGCAT CAACGACCGG GTGGACGCCA TGATGGCGCA GGGTTTCCTC GATGAGGTGC GAAACCTCCT CGCCATGGGC TGCGGGCCGG AGCTCAAGCC CATGCAGTCG CTGGGCTACA GGCAAATGGC GCGCCATCTG CGCGGGGAGA TGTCCCTGGA TGAGGCCGTG AACGAAATCC GGCGCGACAC CCGGCGCTAC GCCAAGCGGC AGCTCACCTG GTTTCGCGCC GACCCGGAAT ACCGGTGGTT CGATGCCGCG GACACGCACG GGCTTGTGGC CCGGATCGTG CGGGAAACCC CCGATCTTCA CGACAACCGG TTACGGTAG
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Protein sequence | MNDTTAKTLN CSPASRDGFP ETLGDFGRTR VDLPVVLVAG PTGVGKTAFA VELARALGSE IVNADSMQVY RHMDIGTAKP TPRERSAVPH HLIDIVDPDE PFDAGDYLAR ARPVIATLHE AGKVPIVVGG TGLYLKVLTR GICAGAPGDP DVRRRLIEEE LTLGLPALHE RLRDVDPPLG ARIHPNDRQR ILRALEVFHH SGKPLSYWQR QHRFEDAPYR TLKIFLHRPR EVLYARINDR VDAMMAQGFL DEVRNLLAMG CGPELKPMQS LGYRQMARHL RGEMSLDEAV NEIRRDTRRY AKRQLTWFRA DPEYRWFDAA DTHGLVARIV RETPDLHDNR LR
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