Gene Sfum_1917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1917 
Symbol 
ID4459788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2335815 
End bp2336837 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content63% 
IMG OID639702684 
Productrod shape-determining protein MreB 
Protein accessionYP_846037 
Protein GI116749350 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1077] Actin-like ATPase involved in cell morphogenesis 
TIGRFAM ID[TIGR00904] cell shape determining protein, MreB/Mrl family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.695972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000105138 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTGAAC GGCTTTTATC ATATTTTTCC AAAGACCTGG CCATGGATCT GGGGACCGCC 
AACACGCTGA TCTATCTCAG GGGCAGGGGT GTCGTCCTGA ACGAACCGTC GGTGGTCGCC
ATCAACCAGG ACACCCACCA GGTGATCGCC GTGGGGCAGG AAGCCCGCAA CATCATCGGG
CGCCACAGCC AGCGCGTGGT CACCATCCGG CCGCTGAAAG ACGGTGTCAT CGCCGATTTC
GAAGTCACCG CGGTGATGAT CAAGTATTTT CTGAGCAAGG TGCTCAAACG CCGTCAGTTC
GTCCGGCCCC GGCTGGTGGT GGCCGTTCCC ACGGGCATCA CGTCGGTGGA GAAACGGGCG
GTCATCGAAG CGGCCGAACA GGCCGGGGCG CGGCACATCC ACCTGGTCGA GGAACCCATG
GCCGCGGCGA TCGGGACCGG TCTGCCCGTG GACCAGCCGT TCGGCAACAT GATCGTGGAC
ATCGGCGGCG GCACCACCGA GGTGGCCGTC ATTTCGATGT TCGCGGTGGC TTACAGCGAA
TCCGTGCGGG TGGCGGGGGA CGAAGCCAAC GAGGCCATCC TTCGTTATAT GCAGCGGGAG
CGGCAGATGA TCATCAGCGA AGTCCTGGCC GAGAACATCA AGATGAAAAT CGGCACGGCG
GCGCCCCTGG ATCAGCCCGA GACGCTGGAA GTCACCGGCA AGGAAATCCT CACCGGCATT
CCCCGCACCT TCACCGTCAC CGATGAGGAA ATCCGGGAAG CCATCAAGGA ACCGGTCTAT
GCCATCGTGG AAGCGGTGAA GCGCGCCCTG GAAAAAACGC CGCCGGACCT TGCGGCGGAC
ATCCACGACA AGGGATTCTG GCTGGCCGGA GGCGGAGCGC TGCTCCGGGG CCTCGACCGG
CTGCTCAGCC AGTACACCAC GCTCAAGGTG AACATCGCCG AAGATCCCCT CACCGCGGTC
GCGCGCGGTG CCGGCACGGT CATCGAACAC CTGGATTTTC ACCGGTCCGT GTTCATCAAC
TAG
 
Protein sequence
MFERLLSYFS KDLAMDLGTA NTLIYLRGRG VVLNEPSVVA INQDTHQVIA VGQEARNIIG 
RHSQRVVTIR PLKDGVIADF EVTAVMIKYF LSKVLKRRQF VRPRLVVAVP TGITSVEKRA
VIEAAEQAGA RHIHLVEEPM AAAIGTGLPV DQPFGNMIVD IGGGTTEVAV ISMFAVAYSE
SVRVAGDEAN EAILRYMQRE RQMIISEVLA ENIKMKIGTA APLDQPETLE VTGKEILTGI
PRTFTVTDEE IREAIKEPVY AIVEAVKRAL EKTPPDLAAD IHDKGFWLAG GGALLRGLDR
LLSQYTTLKV NIAEDPLTAV ARGAGTVIEH LDFHRSVFIN