Gene Sfum_1915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1915 
Symbol 
ID4459786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2334627 
End bp2335298 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content62% 
IMG OID639702682 
ProductCBS domain-containing protein 
Protein accessionYP_846035 
Protein GI116749348 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.451224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000680839 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTACGTCG GCTGGTATAT GAAGACCAAG CTGCTGACCA TAACCCCGGA AACCTCCGTG 
TTCAAGGCCC GGGAAATGAT GGACAACCAC CGTATCTCGC ATCTGCCGGT CACCGACGGC
AAGGCGCACC TGGTGGGCCT CGTGACGGAC CGGGATCTCC GGCAGGTCTG GGCTTCTCCG
GCCACCACGC TGAGCGTGCA CGAGCTCACC TACGTGCTGC AGAAACTGAC CGTGGCCAAC
GTCATGACGC GCAATGTCGT AACCGCCACT CCCGACATGC ACATCGAGCG GGCCGCGCTC
ATCATCCACG ACAAGAAGTT CGGAGCCCTC CCGGTGGTCA AGGACGACAG GCTGGTGGGG
ATCATCACGG TCACGGACCT GATGCAGGTG GTGCTGACCG CTCTCGGGTT GAGCGACAAC
ACCAAGCGGC TGTCGCTGCT GGCGGTCGAT CGCATCGGGC TCCTGGCCGA GGTCTGCAAT
TACATGGCGC AGGCGGGAAT CAACATCAGC AGCGTGCTGT TCGTCCCCCT CGTCGCCCAT
CCCGATGTCT GGCAGGTCAT CCTGCGGGTG AACACGGATG TCTACGATAA GGCCGTGTCC
ATCCTCACCG AGGCGGGGTA CAAGGTGATC ACCCAGTACG TTGAGGATCT CACTGCCTAC
CTGCCGCGCT GA
 
Protein sequence
MYVGWYMKTK LLTITPETSV FKAREMMDNH RISHLPVTDG KAHLVGLVTD RDLRQVWASP 
ATTLSVHELT YVLQKLTVAN VMTRNVVTAT PDMHIERAAL IIHDKKFGAL PVVKDDRLVG
IITVTDLMQV VLTALGLSDN TKRLSLLAVD RIGLLAEVCN YMAQAGINIS SVLFVPLVAH
PDVWQVILRV NTDVYDKAVS ILTEAGYKVI TQYVEDLTAY LPR