Gene Sfum_1913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1913 
Symbol 
ID4459784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2332864 
End bp2333844 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content69% 
IMG OID639702680 
ProductROK family protein 
Protein accessionYP_846033 
Protein GI116749346 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.435171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000844821 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACCGAGG ACCTGGTAAT CGGAATTGAT GTCGGCGGGA CCAACATGCG ATCGGCCCTC 
GTCGATCCCC GGGGACGAAT CGTTCTGCAG AGCCGGACGG CGACCGGGGC GTGGCTCGAG
GGCCGGGAGA CGGCCCGCCG CCTGATCGAG GAATGCCGTT CCCTGCGGCT CGCCGCGTCC
GGTTTCGGCG CGGCCGTGCG GGCCGCGGGC CTTGGAGTGG CGGGCAGGAT CGATCCTCGT
GAAGGACGCG TCGTCTTTTC TCCCAATCTC CCCCGTATGA ACGGCTACCC TCTTGCCGCG
GAGCTCCGAA CGGCGCTGGA CCTTCCCGTG GTCATGCTCA ACGACGCCGA TTGTTTCGGC
ATCGGTGAAA GCCGGTTGGG CGCGGGCCGA TCCATTCCCA ACTGGGTCGG TCTGACCCTC
GGAACGGGGG TGGGAGGGTG CCTGGTTCTC GACAATCATT TGTGGACCGG GGACAACCTG
GGGTTTGCGG GCGAAATCGG GCACATGATC GTCGTCCCCG GCGGACGCCC CTGCGCATGC
GGCGCGCGCG GGTGCCTGGA GGCCTACGCG TCGGGTCGGG CCCTGGTCGA AGGGTTCCTG
GAAGCGGCCG CGACGGGCGC ACCTGTAGCG GGAATTGAAC AGAGGCCGCT GGAGCCCGCA
AAGGTCGCCG CGCGGGACGT TCACCGGCTG GCGCTGCAGG GAGATCCCCT TGCGCGTGAG
GTGTTCCGGC GCATGGGATG GGCCATCGGG CTGGCGTTGA GCAATTGCTT CACGGTGCTG
GGCGTGCGGC ACGCCGTCAT CGGCGGGGGA GTGAGCGCGG GTTGGGACCA GTTCGAAGGG
GCGCTCGTGG TGAGTCTTGC CGAGCACGCG ACGATGTTCG AAGCCGCGGA CGCGGTCATC
CGGCGGGGTG TCCTGGGAGA TGATGCGGCA CCGCTCGGCG CGGCCCTGGC CGCCTGGCGG
CAGCTCGGGC ATGGAGCCTG A
 
Protein sequence
MTEDLVIGID VGGTNMRSAL VDPRGRIVLQ SRTATGAWLE GRETARRLIE ECRSLRLAAS 
GFGAAVRAAG LGVAGRIDPR EGRVVFSPNL PRMNGYPLAA ELRTALDLPV VMLNDADCFG
IGESRLGAGR SIPNWVGLTL GTGVGGCLVL DNHLWTGDNL GFAGEIGHMI VVPGGRPCAC
GARGCLEAYA SGRALVEGFL EAAATGAPVA GIEQRPLEPA KVAARDVHRL ALQGDPLARE
VFRRMGWAIG LALSNCFTVL GVRHAVIGGG VSAGWDQFEG ALVVSLAEHA TMFEAADAVI
RRGVLGDDAA PLGAALAAWR QLGHGA