Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1909 |
Symbol | |
ID | 4459780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 2328598 |
End bp | 2330796 |
Gene Length | 2199 bp |
Protein Length | 732 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639702676 |
Product | RecD/TraA family helicase |
Protein accession | YP_846029 |
Protein GI | 116749342 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.564024 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000014529 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCGGAAC AAATCAGAGG CTTGGTGGAA CGCCTCACCT ACAGCGCGGA GGAGAACGGG TACAGCGTCC TCAAGGTCAA AATCCCGGGC AGGCGGGAAC TCGTGACGGT AGTGGGGAAT TTCGTGTCGG TGACCCCCGG CGAGGTGCTC CTCATGGAAG GTTCCTGGAC GGTGCATTCC CGTTTCGGGG AGCAGTTCCA GGTGGAGCGC TACGAGACGA CGATGCCGTC CACCGAGGTG GGCATCCGCA AGTACCTGGG ATCCGGACTG ATCCGGGGTA TCGGGGCCAA GATGGCGGAC CGCATCGTGG ACCGTTTCGG GGTGGATACC CTGGAAGTGA TCGAAAACGA ACCCGAACGG CTGCGGGAGG TCGAGGGGAT CGGGGCGTAC CGGCTGGACC GGATCCGCAA GGCGTGGGAG GAACAGAGGG ACATCCGCGA CGTGATGGTT TTTCTTCGGA CTCACGGCGT CAACGCGGCG TATGCGGCCC GCATTTTCAA GCACTATGGC AAGAGCTCCC TGGAAGCGGT CAAGGAGAAT CCCTACCGGC TGGCCATGGA CGTATCGGGG ATCGGCTTCC TCACCGCGGA CCGGATCGCG CAGAGCCTGG GTTTTACGGC GGACTCCCCG CTGCGGGCCG AGGCGGGCGT CCTGTTCGTG CTCCACCGCA GCTCGGAGGA GGGGCACGTG TGCGTTCCGC ACGAATGGCT GGTCGAACAA TGCCGGGAGT TGCTCCAGAT TCCGTCCGAG GTGCTCCGGG ACGCCGTGTC CCGGCTGACG GCCGACCGGA GGCTGGTCCA GGAGTCCCTG CCGCCTCAAG CCGCAACCCG TTTCGGTGAG GATCGGGCCG TCACCCTGCG GGGCTACCAC GTGGCGGAAA CCGAAGTGGC CCGGCGGCTC ACCCAGCTGC AGACGTACCG GCCGTTCCGG CGCGGGGTGG ACCCGGAGGC GGCGGTCAAA TGGCTGAAGA ACAAACTGCC CTTCAAGCCG GCTCCGCTGC AGGAAGAGGC GGTGAAGCGC GCCTTGACCG ACAAGGTCGT GGTGATCACG GGCGGCCCCG GCACCGGGAA GACGACCCTG GTCCGGGCGA TTCTCGCCGT CTTCAGGGAA ATGCACGCGC GGATATGCCT GGCCGCGCCG ACGGGGAGGG CGGCCAAGCG GTTGAGCGAA ACCACCCGGT ACTCCGCCGG GACGATTCAC CGGCTGCTCG AATACAGCCC TCAGGCCGGC GGTTTCGTCC GCAACGAGCT CAAACCCCTC CCGGCGGATC TCGTCATCGT CGACGAGACC TCCATGCTCG ACCTTCTGCT CATGCATTAC CTGCTCAAGG CGGTGCCGCC CCAGGCGACC CTGGTGCTGG TGGGCGACGC GGACCAGTTG CCTTCGGTGG GGCCGGGGAA CGTGCTCAAG GACATCATCG ATTCGGGGCG ATTTCCCGTG GTGAGACTCG ACGAAGTCTT CCGCCAGGCC AGGCAGAGCC GCATCGTGGT CAACGCGCAC CTGGTGCGGC AGGGGAAGTT CCCGCAAATG GAGAACGAGC GGGAGGGCCT GCAGGACTTT TACTTCATTG CAAAGGAAGA CCCCGAGGAA GTGTGCCGCG TGATCCTCAA ACTGTGCACG GAACGCATAC CGCAGCGGTT CGGTCTCGAC CCGGTGGAGG ACATCCAGGT GCTCAGCCCC ATGCACCGGG GGGCCGTCGG CGCCCAGCGG CTCAACACCG CGCTCCAGGA GGCGCTCAAC CCCGAAACCC GCTTCGTGCA GCGGGGAGAC CGGACCTTTC GGCTGCACGA CAAGGTCATG CAGGTCCGCA ACAACTACGA CAAGGACGTC TTCAACGGGG ACCTCGGGCG CATCGCGAAG ATCGACTTCG AAGAGCAGCT GGTGGAGGTG GATATCGACG GCCGGCGGGT CCCATATGAC TTTTCGGAGC TCGACGAACT GGTTCTCGCC TATGCGGTCA GCATCCACAA GGCGCAGGGC AGCGAATACC CGGCCGTTGT CTTCCCGCTG CTCACCCAGC ATTTCATGAT GCTTCGGCGC AATCTCCTCT ACACCGCCAT CACCCGCGCC CGCAAGCTCG TGGTTGTCGT GGGGAGCAGG AAGGCCCTCG CCATCGCCGT TCGGAACAAC GACACCGACC GGAGGTTCAC GCTGCTGCGC GAACGTTTGG AAGGGGTCGT TTTCACGAGC CCGGAGTGA
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Protein sequence | MAEQIRGLVE RLTYSAEENG YSVLKVKIPG RRELVTVVGN FVSVTPGEVL LMEGSWTVHS RFGEQFQVER YETTMPSTEV GIRKYLGSGL IRGIGAKMAD RIVDRFGVDT LEVIENEPER LREVEGIGAY RLDRIRKAWE EQRDIRDVMV FLRTHGVNAA YAARIFKHYG KSSLEAVKEN PYRLAMDVSG IGFLTADRIA QSLGFTADSP LRAEAGVLFV LHRSSEEGHV CVPHEWLVEQ CRELLQIPSE VLRDAVSRLT ADRRLVQESL PPQAATRFGE DRAVTLRGYH VAETEVARRL TQLQTYRPFR RGVDPEAAVK WLKNKLPFKP APLQEEAVKR ALTDKVVVIT GGPGTGKTTL VRAILAVFRE MHARICLAAP TGRAAKRLSE TTRYSAGTIH RLLEYSPQAG GFVRNELKPL PADLVIVDET SMLDLLLMHY LLKAVPPQAT LVLVGDADQL PSVGPGNVLK DIIDSGRFPV VRLDEVFRQA RQSRIVVNAH LVRQGKFPQM ENEREGLQDF YFIAKEDPEE VCRVILKLCT ERIPQRFGLD PVEDIQVLSP MHRGAVGAQR LNTALQEALN PETRFVQRGD RTFRLHDKVM QVRNNYDKDV FNGDLGRIAK IDFEEQLVEV DIDGRRVPYD FSELDELVLA YAVSIHKAQG SEYPAVVFPL LTQHFMMLRR NLLYTAITRA RKLVVVVGSR KALAIAVRNN DTDRRFTLLR ERLEGVVFTS PE
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