| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1906 |
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| Symbol | |
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| ID | 4459777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 2324965 |
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| End bp | 2326824 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639702673 |
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| Product | integral membrane sensor hybrid histidine kinase |
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| Protein accession | YP_846026 |
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| Protein GI | 116749339 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.343997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000148298 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAACGATA CAAAAACGAC GCACAACGAC TTTGCAGACA CCATCCGGGA GGAGCAGGTT
CGCCTGGCGA TGCGGCAGCT TGCAACGATG CAGGCCGCTT CCTTCATCGT CGCCCTGGTC
CTGTGTTTCA TCGTCCGCAA TCAGGTCCCC TTGCCGAAAA TCCTCGTGTG GCTGTCGCTC
ATCCTGGCGG TTGTCGTCGG CCGGGTACAC CTTCATCGTC GATTCGTCAA GATACGGGAC
GGTTCTTTTC CCGGAAAGCA GTGGACGAAC GTTTACCTTG CCCTGGCCCT TTTTTCGGGA
ATCGTCTGGG GGCTGTCCGC CTTTCTGCTG TATCCGTCCG ACAACATGGC GCTGATGCCC
TTTTTCGTGC TCGTCATGGC CAGCCTCGCC GCCGCCACCA CGGTGTCGCA TTCCTCCATC
AAGCTCGCCC CCGCCGCATG GGCGGTGCCG GCCATGCTGT TCTACGCCGC GCGGTGCGTC
ATGGAAGGGG GACAGATCGG AGTCACGATC GCTTTTCTGA TCGTCGTCTA CCTGTTCACC
ATCGTTCGCT ATTCGTTCAC CCACAACAGC GCCATCACTT CGGCCATCGC GCTGAAATTC
GAGAACCTCA AGCTTCTCGA GGAGGTGCAG ACGGTCAACG AGAAGCTGCG CCGGGACATT
ACCGACCGCA AACGGGCGGA GGTCGAGCGG CTCGAAATGG AACGACGGCT GCTCCACGCC
CAGAAGCTCG AGAGCCTCGG CGTCATGGCC GGCGGCATCG CCCACGACTT CAACAATCTC
CTCATGGCCA TCATGGGAAA CCTGGACCTG ACCCTCCTGG ACCTCCCCAA CGATTGCCGC
GCCCGCACCT GCGTCGAGCA GGCCTACAAG GCAAGCCGCC GGGCGGGGGA GCTGACGAGC
CAGATGCTGG CCTATTCCGG GAAAGGGCAC CTGCGGCCCT CTCCCATGGA CCTCAGCGAC
GAGGTGCGCA AGAACGCGCA GCTCTTCCGC GCCGCCATTG AGCGGACCAT CACCCTGGAG
GTTGCGCTGA GCTCCCGGCC GGCCACCGTC GAGGCCGATC CGGGCCAGAT TCAGCAGGTC
GTCATGAACC TCATCACCAA CGCCTCCGAA GCCATCGGCC AGAACCCCGG CGGGATCGCC
ATCACCACGG GGACGATGGA TTGCGACGAG GAGTGCCTGA GTCGAAGCTG CCTGGACGAA
AAGCCTCCCC CGGGACGCTT CGCCTACATC GAGGTGTCGG ATACGGGCTG CGGAATGGAC
GAGAAGACCC GGCAGCGCCT TTTCGACCCC TTCTTCACCA CCAAGTTCAC GGGCCGAGGC
CTCGGGATGT CCGCGGTTAT GGGGATCGTG CGGGGTCACA GGGGGGCCAT CCTGGTGGAG
AGCGAGGTGG GCTGGGGAAC CACTGTCCGG GTGCTGTTCC CCGCCTGCGA ACCACCCGTT
TCCGCGGCCC CCGAGCTCCC GGCCGCGGCG GCAAGCGAGC CGCCCATGAT GGGGTCGGTC
CTGGTGGTCG ACGACGAACA CGGGATTCGC GAGCCGTGCA TGGCTCACGT GGAGCGGCTC
GGGTTCCATG CCGTGGGAGC CGCGGACGGC GAGGAGGCTT TGCGGCTCTT CCGGGACAAC
GCAAAGGAAT TCGTCTGCGT GCTTCTCGAT TTGACCATGC CCCGCATGAG CGGCCTGGCC
GCATACCAGG AGTTGAAGCG GATACGGCCG GACGTCCCGG TGATCCTCTG CAGCGGCTAC
GGCGAAGAGG ATGCCACCAA TCGCTTCGCC GGGCAGAAAC TGGCCGGCTT CCTCCACAAG
CCCTATACCC TCGAGGAGCT CAAGCAAAGC CTGACCCGGG CGCTCAACGC GGCCGCCTGA
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| Protein sequence | MNDTKTTHND FADTIREEQV RLAMRQLATM QAASFIVALV LCFIVRNQVP LPKILVWLSL
ILAVVVGRVH LHRRFVKIRD GSFPGKQWTN VYLALALFSG IVWGLSAFLL YPSDNMALMP
FFVLVMASLA AATTVSHSSI KLAPAAWAVP AMLFYAARCV MEGGQIGVTI AFLIVVYLFT
IVRYSFTHNS AITSAIALKF ENLKLLEEVQ TVNEKLRRDI TDRKRAEVER LEMERRLLHA
QKLESLGVMA GGIAHDFNNL LMAIMGNLDL TLLDLPNDCR ARTCVEQAYK ASRRAGELTS
QMLAYSGKGH LRPSPMDLSD EVRKNAQLFR AAIERTITLE VALSSRPATV EADPGQIQQV
VMNLITNASE AIGQNPGGIA ITTGTMDCDE ECLSRSCLDE KPPPGRFAYI EVSDTGCGMD
EKTRQRLFDP FFTTKFTGRG LGMSAVMGIV RGHRGAILVE SEVGWGTTVR VLFPACEPPV
SAAPELPAAA ASEPPMMGSV LVVDDEHGIR EPCMAHVERL GFHAVGAADG EEALRLFRDN
AKEFVCVLLD LTMPRMSGLA AYQELKRIRP DVPVILCSGY GEEDATNRFA GQKLAGFLHK
PYTLEELKQS LTRALNAAA
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