Gene Sfum_1898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1898 
Symbol 
ID4459804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2315829 
End bp2316509 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content49% 
IMG OID639702665 
Producthypothetical protein 
Protein accessionYP_846018 
Protein GI116749331 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000220114 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000798188 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGTGGTCA TCATCGCAAT GAGCCTTCGT ACTGAGATGG ATAGACTGTT AAGCCAGTTC 
CGGGTGTCCT GGTCCCAATT AATAAAAGCC TGGCACCTTT GGCTTGCTCT CTTTCTTATA
TTGATTGTGA TCTTTCCGTG TTTGAAATAT GGGTTTAGCG AACCGCGAAT ACGAATTGCT
GGATTACTAC TTCAACTTGC CGGGTTATTC ACCGTAGTAT GGGGAATTCA GAAAACCCGC
ATGCTCTTCG GGCGCCCCGA CTCACTTAGC GTAGTTCGCC AGTGGTTTAG TATCTTTCTT
CCATGCTGGC GACAGGCTGT ATCCGGAGAG GTCAATTCTA CTATGCCAGT GTTTACGGGG
CAGGGGCGTG CAAATGCCGC AGCGAGCGCT AATTCCGATG CCACGATTGA GACACGCGTC
GATAAATTGG AAGAAAATAT ATCGCACATC AACGATCGAA TAACCCAAAC TCAAAAAGAA
ATCGATGATA GATTCCAAAC CCAGGTTGAT CTCTTAGAGA CAGAACAAGA GACACGCAGA
AGACAAGTTG AAGACCTTCG CGCTATGCTG GAGATGTCGG AGATCGGCGG TTTACGCATT
TCTCTTGTGG GTGCACTGTG GTTATTCGTG GGCGCGATAC TCGGCACTGC CGCTCCAGAG
ATTGCTGGGT GGCTGAAATG A
 
Protein sequence
MVVIIAMSLR TEMDRLLSQF RVSWSQLIKA WHLWLALFLI LIVIFPCLKY GFSEPRIRIA 
GLLLQLAGLF TVVWGIQKTR MLFGRPDSLS VVRQWFSIFL PCWRQAVSGE VNSTMPVFTG
QGRANAAASA NSDATIETRV DKLEENISHI NDRITQTQKE IDDRFQTQVD LLETEQETRR
RQVEDLRAML EMSEIGGLRI SLVGALWLFV GAILGTAAPE IAGWLK