Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1898 |
Symbol | |
ID | 4459804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 2315829 |
End bp | 2316509 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639702665 |
Product | hypothetical protein |
Protein accession | YP_846018 |
Protein GI | 116749331 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000220114 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000798188 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGTGGTCA TCATCGCAAT GAGCCTTCGT ACTGAGATGG ATAGACTGTT AAGCCAGTTC CGGGTGTCCT GGTCCCAATT AATAAAAGCC TGGCACCTTT GGCTTGCTCT CTTTCTTATA TTGATTGTGA TCTTTCCGTG TTTGAAATAT GGGTTTAGCG AACCGCGAAT ACGAATTGCT GGATTACTAC TTCAACTTGC CGGGTTATTC ACCGTAGTAT GGGGAATTCA GAAAACCCGC ATGCTCTTCG GGCGCCCCGA CTCACTTAGC GTAGTTCGCC AGTGGTTTAG TATCTTTCTT CCATGCTGGC GACAGGCTGT ATCCGGAGAG GTCAATTCTA CTATGCCAGT GTTTACGGGG CAGGGGCGTG CAAATGCCGC AGCGAGCGCT AATTCCGATG CCACGATTGA GACACGCGTC GATAAATTGG AAGAAAATAT ATCGCACATC AACGATCGAA TAACCCAAAC TCAAAAAGAA ATCGATGATA GATTCCAAAC CCAGGTTGAT CTCTTAGAGA CAGAACAAGA GACACGCAGA AGACAAGTTG AAGACCTTCG CGCTATGCTG GAGATGTCGG AGATCGGCGG TTTACGCATT TCTCTTGTGG GTGCACTGTG GTTATTCGTG GGCGCGATAC TCGGCACTGC CGCTCCAGAG ATTGCTGGGT GGCTGAAATG A
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Protein sequence | MVVIIAMSLR TEMDRLLSQF RVSWSQLIKA WHLWLALFLI LIVIFPCLKY GFSEPRIRIA GLLLQLAGLF TVVWGIQKTR MLFGRPDSLS VVRQWFSIFL PCWRQAVSGE VNSTMPVFTG QGRANAAASA NSDATIETRV DKLEENISHI NDRITQTQKE IDDRFQTQVD LLETEQETRR RQVEDLRAML EMSEIGGLRI SLVGALWLFV GAILGTAAPE IAGWLK
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