Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1893 |
Symbol | |
ID | 4459799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 2308621 |
End bp | 2313555 |
Gene Length | 4935 bp |
Protein Length | 1644 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639702660 |
Product | Phage-related protein tail component-like |
Protein accession | YP_846013 |
Protein GI | 116749326 |
COG category | [S] Function unknown |
COG ID | [COG4733] Phage-related protein, tail component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0293426 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAT CCAAGGATCT TGTTGAAGGG ACAGCCCCCG TCCCGCCCGG GCACCTGCGG GTGGTGAGCG TCGATCACCC GTTCCGGCGA TCGGAGCGGC GCATCGACCT GGTCGAATGG AAGCCGGGCA TGAGCCTCTC CGACGTCGTC GCATCGCGCG TCCCGGAAAA CCTCCCCGTG AAGGTCTTCC TCGACGGCCT GGAGATCGCC CCCGGCGAGC GCTCCCGGGT TTATCCCATG CCCGGCAGGC AGGTGCTCAT CGTCCCTGAG CTCGGCTTCG ACGACGGATT CAAGGGCATC CTCCGGTTCA TCCTGCAGAT CGCCCTGGTG GCCGCGGGTT TCATCATGCA GGCGATGGGC GTGCCGGGCT GGCTCATCTT CGGAACCATG CTCGTGGGCG GCATCCTCAT CAACGTGCTG CTTCCTCCCC AGGCCCCCAA AAAGCCCGAC ACCGCCCTCG ACAGCCAGGC CTACAACTGG GCGCCCCAGA ACACCGAGCA GCAGGGAGTC CCGGTCCCGC GCTGGTACGG CAAGAACCGC ATCTACGGCA ACATCGTCGC AAGCCACATC GAAAACCGCG ACTCGACCCA GATTCTCAAC GCCCTCATCT GCCTGGGGCT CGGACCGGTG AAAAGCCTCG GGGATTTTCG CATAAACGAC CAGGCCATCA AGCACTTCAA GGCCGTGCAC GTGCGCGTCC GCTACGGCCG CCTAAACCAG GCCCCCATCT CCGACTTCAA GAAGACCAAG ATCGAATACC CCGCCTCGGT CAAGGTGGTC CACGGCTCCC CGTACACCTA CACGACCGTG GGAAACGATT TCGACGCCCT GGAAGTCGAT ATCTCCTTTC CCGAGGGGCT CTGGCATTAC CCGCCCGAAA GCTCGGGCCT CGAAGGCTTC GCCGTCCGGT TCCAGATCGC GGTGCGAAAG GTCGGAACCT CCACGTGGCA TCACATCGCC CGGCAGCCCT CGGATGTTGC CGGGTACAAC AAGGTGTTCG TCTCCGGGGC CCGCTGGTCC CTGGGCAAAT GGGTGGACCC GGGGGCCGAT CCCGACTGGA CGGGCCACGA AGGGGCGGAC GTCTGGTTTG AAAACCTCGC CGGAACGTCG GGGTTCTACG ACCATTACGA AGGGGAGGTC TATCCCGACC AGACCGAGCT GTTCTGGCAC TGGATCGGAG ACGACGGGGG CGAATACATA GCCACTTCAA CCGATTCCTA CGAGGTCTGG CAGGATTATT TCGACGCCTT CGGCCAGAGC GAGAAGCCCA GGCACTGGAC CATGCGCTAC CGGGTGCCGG ACGGCGAAAA GGGGCAATAC CAGGTTCGGG TGACGCGGGT GACGCCCACG GCCACTCCCC AGAACCGGTA CGGCCAGGAC ATGTATTTTG CGGGGGTGGC CGAGGTGCTG TGCGACCCCT TCGAATACCC CCGGCACGTG CTGGTCGCCG TGAGCGCCCG GGCAACGGAC CAGCTCTCGG GGTCGCTGCG GTTTTCGTGC GTCGGGGAGA TGGCCGTGAT CCGGGTCTTT GACGGATCGA GCTGGAGCAT CGAGTACTCG AACAACCCGG CCTGGGTCGC CTACGACATC CTGAGCCAGC CCGTGATCGG AGGCGCGGGC ACGGAGGCCA ATCCCTACAC CGTCTTGCGC TACGACGGTT TGCCTCCCGA GCGCCTCGAT GCGCCAAAAT TCCTTGAATG GGCGCAGTAT TGCGACGAGA AGGTAAGCGA CGGCACGGGG TCGCCCTTCA GCACCGCCGT CGCCTACGCC GTAAACGACA GGGTGCGCTA CGCGGGCAGG ATATACATGT GCATCCAGGC GACCGCGGTC CCTTCGCCCC CGCCCACGGA TACGGCCTAC TGGGCCGTAA CGAACGAAGG GCTTGAAAAG CGCATCACCT TCAACGGCGG CTTCGACTAC GACACGTCCA TGTGGGAGGC CGTGGCGCGG GTCTGCCAGG TGGGCCGCGC GATTCCCGTC TGGAACGGCT CCAAGCTCAC CGTCGCAATC GATAAGCCCG CCGATCCCGT GAACCTCTAC ACGGTGGGAA ACATCGAGGA GTCCAAATTC CGGGAAATCT TCCTGCCCCT TGAGGAGCGG GCGACGGAAA TCGAGGTCGA TTTCATCGAC GGCGAAACCT GGGAGCGGGA CAAGCTCACG GTCTACCGGC CGGACATCGC GCGGTCGACC GGGTACCGGG CGGCGATCGA GCTCTTCGGG GTGACGAAGC GCAGCGAGGC GTGGCGCGCG GGCATGTTCC GGCTCATGTG CAACAAGTAC CTGGTCCGCA CCGTGGAGCT CGATCTCGAC GTCGAAGCCG TGAACGCGGA CATAGGAGAC GTGGTCCACA TCCAGCACGA CGTGCCCCAG TGGGGCGAAG GGGGCCGGAT CGCCCCGGTC CTTTCCTTCA CCTCCGGAGG CCCGTATGAA ATCAAGCCCG GCGACACCGT CATCGGGGGT ACCTCCTGGG CGTCGGCGCG GGTTGTGGCG GTTGACGTCA CGTCCGGGTC CTGGGCCGCC GGCACGGCCG CAGGCCGCCT CACCCTTGCC GGGCAGAGCG GGAACTTCGT CGCCGAAGAG CTCAACGTGC TTGAAAACTT CGACGTGGCC ACGGTCATAG CCTCCCGGGT CACCCTGGAC AAGGCGGTGA GCATCGAGGC GGGGCTCACC TGCAAGGTGA TCGTGCGCCT CTCCGGGGAC TCCCTTGCAG AACGCATCGT AACCTCCGAG GCAGGATCGC ACGAGACCCT TTCCGTTTCG GTTCCCTTCG ATCCGATCCC GGCGCCTTTC GACGTCTACG CCTTCGGGCA GGTCGACACC ATCACGCGCC CTTTCCGGGT GCTTTCCATC AGGAAGTCGA TGGAGCAAAA ATGCACCCTC TCCCTTATCG AATACCGCCC GGAGGTCTAC CAGTACGAGG ATTCGGCCCC GAACCCGGGG AGTGCGGCGC AGCTCGCCCT CAAGGCCATG CAGCCCAGGC GGGTGAAACT GACCGAAATC AGCGTCGACG GCCCCGGGGG CAGGCAGGTC AAGGGCATCG ACATCGATTT CGAACCCTGC GCCGATCCGG CCTTCAAGCA CTACGAGGTG TGGTACCGCG TGGCCGGGCG CAAGGGAGAA AAGGCCGAAT GGCTCTTTTC CGGGGTGGCC GACGGCTCTT CCTACCAGGT TCTCGGGGTC GAGCGCCAGA CCCGCTACGC CGTGGCGCTC CTGCCGGTGG ACACGGCAAA CCGCAAGCTC TTCATCGAAT ACGCCGCCTC GCGCTCCATC CTCATCCACG GCATCGAGCT CGCCGCCGAT CTGCGCTACA AGACCGGAAC CACGGTGGAC GCCCTGGAAC CCGCAGAAGC CGGCGCGACT TTGGGCTCGA CCCTCGGCAA CGGCTCCACC GTTCCCGGCA ACCTCAAGAA ATCCGACGGC GCCACCCTGG TGACCGAACA GGATCTCTTC CTCGACGGCC TCTGGGCGCG CGCCATCACC CTGACCGACG GCGGCTACTT TCGCACGGGC CTCTCCCCGG ACCCCAGGAT CATCATCAGC AAGGGACAGA TCGCCGGCTA CTCCGATGAA ACCACCAAGG AATTCTACCT GCTGGCAAGC ACCGGGAAGG CGTATCTGGG GGGCGGCAAT GTCATCCTGG AGAGCACTGG CGTCAGGATT CTTCCTGTAA CCGGTCAAAC TTGGGACTCC ACTCGAAGTG TCAACTGGGG AACGAATGTT TCCTATCCTA TCGCGCGGAT ATGGGCATGG AATGACACTT TCGACGATTC TCTGGTGATT GAGGTCAACG GGGATTACCA CTTCTCTCAG GGCGGCCACA TGTATTTTAG GGCCTATGGG GTGGGCTCCG GGAACCACAG TACGATCAAG TTCAATGCGT CAAACGACAG CTACGCCGTC GCACTGGAAA TGAACACTGA AAGCGACGGG CGTTTCAGGG TCGATGCGGA TGTCATTCAA TTGAAGACAA CACCTTCTGG CGGGGGAATC GTAAACATCG ATGCCTATAC GATATATCTC GGTGGCGTGG TTACGATTCT GGCTGGGCAG ATTAAATCCA CCCTGGAAAC TGGAACGGCA CCGATGACGG TTGCCTCGAC CACAAAGGTT ACGAACCTCA ACGCCGACCA GGTGGACGGC AAAGACGCTG CCGATTTCTT TCCAATCAAT GGCGGCCAGC TCACCGGGGC GAACATATCC CGGAATGTCG ACGACAGCTA TCTGAACGTG CATGGCGCCA CCAACGTGAC TTCCGGGGCT GGGGTAACGC TCTACGGCCG CGATCATGCG ACTTGTGCCG GGAATATGTA CCTGACCTTT GGCGGGTATG CGTCGACCGG CAAGCTCGTT ATCCGGAATC GCAACGCATC GGAATACAAT AATGTGTTCG AGATTGATTC CGTCGGGAAC ATCGTCACGT CCGCGCTGCG GATCGGGGCC TACGTCAACG ACTCATATCT CAGCATTTGC GCCGGGGAGG ATGGGCTCAA AGGGGCGTCG CTTGTCATGT ACGGCCGCGC TCATGCATCG AGTCCCGGCG AGGCGTACCT GAATCTAGGC GGATATACCC CTTACGGAAA GTTCACGATC CGGCAGCGCC TGACGGATGA GTCGCTGGTC AACCTGTTTC TTTTCGACAA GGATGCAAAC CTCAGAATCG GCGGAACCAC GTTCGGCACG AGCGCCGCGA GGGTGCTCTG CGTCGGCACG GGGACCGCGC CCACCAGCTC CCCGGCCGAC GCCTTCCAGA TGTATTCAAA AGATATATCG GCCGGGAACG CCGCCCCGCA TTTCCGTCTT GAAGGCGGCC CGGAGCTCAG GCTCTACCAG CAACCGCACA TTGCGGACCC GGATGCCGAC TCCACGAGCT TGCAGACGGC CGTCAAGGCG ATCCTGGTCG CATTGGAAAA CATGAGGTTC CTCGCAACAT CGTAA
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Protein sequence | MSESKDLVEG TAPVPPGHLR VVSVDHPFRR SERRIDLVEW KPGMSLSDVV ASRVPENLPV KVFLDGLEIA PGERSRVYPM PGRQVLIVPE LGFDDGFKGI LRFILQIALV AAGFIMQAMG VPGWLIFGTM LVGGILINVL LPPQAPKKPD TALDSQAYNW APQNTEQQGV PVPRWYGKNR IYGNIVASHI ENRDSTQILN ALICLGLGPV KSLGDFRIND QAIKHFKAVH VRVRYGRLNQ APISDFKKTK IEYPASVKVV HGSPYTYTTV GNDFDALEVD ISFPEGLWHY PPESSGLEGF AVRFQIAVRK VGTSTWHHIA RQPSDVAGYN KVFVSGARWS LGKWVDPGAD PDWTGHEGAD VWFENLAGTS GFYDHYEGEV YPDQTELFWH WIGDDGGEYI ATSTDSYEVW QDYFDAFGQS EKPRHWTMRY RVPDGEKGQY QVRVTRVTPT ATPQNRYGQD MYFAGVAEVL CDPFEYPRHV LVAVSARATD QLSGSLRFSC VGEMAVIRVF DGSSWSIEYS NNPAWVAYDI LSQPVIGGAG TEANPYTVLR YDGLPPERLD APKFLEWAQY CDEKVSDGTG SPFSTAVAYA VNDRVRYAGR IYMCIQATAV PSPPPTDTAY WAVTNEGLEK RITFNGGFDY DTSMWEAVAR VCQVGRAIPV WNGSKLTVAI DKPADPVNLY TVGNIEESKF REIFLPLEER ATEIEVDFID GETWERDKLT VYRPDIARST GYRAAIELFG VTKRSEAWRA GMFRLMCNKY LVRTVELDLD VEAVNADIGD VVHIQHDVPQ WGEGGRIAPV LSFTSGGPYE IKPGDTVIGG TSWASARVVA VDVTSGSWAA GTAAGRLTLA GQSGNFVAEE LNVLENFDVA TVIASRVTLD KAVSIEAGLT CKVIVRLSGD SLAERIVTSE AGSHETLSVS VPFDPIPAPF DVYAFGQVDT ITRPFRVLSI RKSMEQKCTL SLIEYRPEVY QYEDSAPNPG SAAQLALKAM QPRRVKLTEI SVDGPGGRQV KGIDIDFEPC ADPAFKHYEV WYRVAGRKGE KAEWLFSGVA DGSSYQVLGV ERQTRYAVAL LPVDTANRKL FIEYAASRSI LIHGIELAAD LRYKTGTTVD ALEPAEAGAT LGSTLGNGST VPGNLKKSDG ATLVTEQDLF LDGLWARAIT LTDGGYFRTG LSPDPRIIIS KGQIAGYSDE TTKEFYLLAS TGKAYLGGGN VILESTGVRI LPVTGQTWDS TRSVNWGTNV SYPIARIWAW NDTFDDSLVI EVNGDYHFSQ GGHMYFRAYG VGSGNHSTIK FNASNDSYAV ALEMNTESDG RFRVDADVIQ LKTTPSGGGI VNIDAYTIYL GGVVTILAGQ IKSTLETGTA PMTVASTTKV TNLNADQVDG KDAADFFPIN GGQLTGANIS RNVDDSYLNV HGATNVTSGA GVTLYGRDHA TCAGNMYLTF GGYASTGKLV IRNRNASEYN NVFEIDSVGN IVTSALRIGA YVNDSYLSIC AGEDGLKGAS LVMYGRAHAS SPGEAYLNLG GYTPYGKFTI RQRLTDESLV NLFLFDKDAN LRIGGTTFGT SAARVLCVGT GTAPTSSPAD AFQMYSKDIS AGNAAPHFRL EGGPELRLYQ QPHIADPDAD STSLQTAVKA ILVALENMRF LATS
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