| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1878 |
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| Symbol | |
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| ID | 4459819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 2295895 |
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| End bp | 2297271 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639702645 |
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| Product | SPP1 family phage head morphogenesis protein |
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| Protein accession | YP_845998 |
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| Protein GI | 116749311 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2369] Uncharacterized protein, homolog of phage Mu protein gp30 |
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| TIGRFAM ID | [TIGR01641] phage putative head morphogenesis protein, SPP1 gp7 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.524046 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCTT TCCCGGAACT GCTCCCGTTC ACGGAAGCCA TCGAATTCTT CAACGCCAAG
AACATCGTGG TCTCCCCCGA TTCCTGGCGG GACGTCTGGG CGTCCGAACA CGTTCACGCC
TTTACCGTGG CCCGGGTCAC CGCGATCGAT GTCCTCGAGG ACATCCGCAA GGCGGTGGGC
AAAGCCGTCG CGGACGGCAC TTCCATTCAG CAGTTCAAAT CCGGGCTGTC CCGGCTGCTG
GCCGCAAAAG GCTGGTTCAG CGAAAAACGG GACAGGCCGC CGGGGGCTCT GACCGGCCCG
CGCCTTGAAA CCATCTACCG CACGAACCTG CAGTCAGCCT ACCAGGCCGG GCGCTTCAAA
CAACTCGTCG AGACGGCCCA CGTGCGTCCC TACTGGATGT ACGATGCCGT CGGCGACCAT
CGCACGAGGC CGCTCCACGC CGCTCTCAAC GGCAAGGTAT ATCGTTTCGA CCACCCGTTC
TGGAACGCCT GGTACCCCCC GAACGGGTTC AACTGCAGGT GTACCGTGCG AAGCCTTTCG
GAAGACCGGT TCGAACGGAT GAAGCTGCCG CTCGAAAACG AGGCGCCACC CCACGGTCCG
GACCCGGGAT TCGATTTCAA CCCCGGAATG GTCCGCTGGC AGCCGGATCT TGCGCGGTAC
GGCCCGGAAG CTCGCGGGCT CATCACCCGG GACATGATCG GGCGCCCCTG GGACATCCCC
TCCCTCGAGG AGGATCTCAC GCGGTTGCGC GACGGATTCG CCCAGACCGG GATCACGGCC
TCAAGAAACC CGCTTACTAT TGCGCCGCTC CCCGGAGAGG GCGTAACGGG GTGGAGCAAC
CCCAGGACGG GGGAAATCGC TCTTCCCGAA GGCGTCTATG ATCGAATCCG CTGGATCCTC
AATATCGGCG CGATCCGGAC GGAAGCGGAA ATCGACGCGT TCCGCCTCCT GATTCACGAA
TTCGGACATC ACCTCGGACA TCCCGTCGAC ATCAAGCGGT ACAACTCCGA TCCGGACTAC
TCGGCGATCA AGGAAGCCGT AAACGACCTG TGGGCCAGGC ACTATCTGGC CGAAGCCGCC
CGGGCGCTCA ACCTGGAATG CAGGCTCTCG CCCTTCACCG AGTCGCGCTC GCGGGCACCG
GGCACCTACT CCGCCTGGGT CGAACACCTG CGGGCCGTTC TGCGCAAGCT CGACATCGAC
GAAACCGATG AGAAGAAGCT CATCACGGAG CTGAACCTCT CCGAGAACGC CGAAAACCTC
TCCGAGCGCT TCTGGGCCAT GGTTCACGAG AAGAAGCCGG ACATCGCCGC GGACCGGCCG
TTCGGGGAGT TGATCCGGCT GTTCTGGCTG TGGGAGCAGC TGATGGACGA GCTGTGA
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| Protein sequence | MKAFPELLPF TEAIEFFNAK NIVVSPDSWR DVWASEHVHA FTVARVTAID VLEDIRKAVG
KAVADGTSIQ QFKSGLSRLL AAKGWFSEKR DRPPGALTGP RLETIYRTNL QSAYQAGRFK
QLVETAHVRP YWMYDAVGDH RTRPLHAALN GKVYRFDHPF WNAWYPPNGF NCRCTVRSLS
EDRFERMKLP LENEAPPHGP DPGFDFNPGM VRWQPDLARY GPEARGLITR DMIGRPWDIP
SLEEDLTRLR DGFAQTGITA SRNPLTIAPL PGEGVTGWSN PRTGEIALPE GVYDRIRWIL
NIGAIRTEAE IDAFRLLIHE FGHHLGHPVD IKRYNSDPDY SAIKEAVNDL WARHYLAEAA
RALNLECRLS PFTESRSRAP GTYSAWVEHL RAVLRKLDID ETDEKKLITE LNLSENAENL
SERFWAMVHE KKPDIAADRP FGELIRLFWL WEQLMDEL
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