Gene Sfum_1876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1876 
Symbol 
ID4459817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2292552 
End bp2294093 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content66% 
IMG OID639702643 
Producthypothetical protein 
Protein accessionYP_845996 
Protein GI116749309 
COG category[R] General function prediction only 
COG ID[COG4373] Mu-like prophage FluMu protein gp28 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCG AACGCACTTC CCGCGCATCC CTTGCCTCCC ATGGCCTCCA CGCCGCCTCG 
CCACCCTGCT CCGCTTTCGA CGGCCCGCCT CCGGTCCTGC TTCCCTATCA GCAACGCTGG
ATCTCGGACC GAAGCCCGGT GAAAATCTGC GAAAAATCAC GACGCGTCGG GCTTTCCTGG
TCGGAAGCCG CCGACGACGC ACTCACCGCC GCATCCCGAA ACGGCATGGA CGTCTGGTAC
ATCGGGTACA ACAAGGACAT GGCCCTCGAA TTCATCCATG ACACCGCCTT CTGGGTAAGA
CAGTACCGGC TGGCCGCCTC GGCTCTCGAG GAAGATCTCG TCAGGGATGA AGACCGGGAC
ATCCTCGCCT TTCGCATCAA GTTCGCTTCG AGCCGCCGCG TGACGGCGCT GTCGAGCCGG
CCCAGCAACC TGCGCGGCAA GCAGGGCAAA GTGGTGATCG ACGAAGCCGC CTTCCACGAC
GACCTCCCCG GGCTGCTCAA AGCCGCCATC GCTTTGCTCA TGTGGGGAGG CCGAGTGGCG
GTCATCAGCA CCCACAACGG CGAGGACAAT CCCTTCAACG AACTGGTCAA GGACATTCGG
TCCGGCCGCA AGCCTTACAG CCTCCACCGC ATCACCCTCG ACGACGCCCT CGCCGAAGGG
CTCCACCGCC GCATCTGCCT GAAGCTCGGA ACGCCCTGGT CGTCCGAAGC CGAATCCGAG
TGGCGCGAGG AACTGGTGAG GGTCTATGGA GAAGACGCCG AAGAGGAGCT GTTCTGCGCG
CCCAGCCGGG GCTCCGGCCT CTTCCTGGCG CGGGCGGTCA TCGAGGGTTG CATGGATGAA
ACCGTTCCGG TTTTCCGCTG GGCATGCCGG ACCGATTTCG CGGAGCTCGG CGAATCCGTA
CGCCAGGCCG ACACCAGGGA CTGGTGCGAA GGGTTGCTGG GCCCGGCGCT TCGAGACCTC
CCCGAAAATT TCGCCACTTG GTGCGGGGAG GATTTCGGCC GCACAGGGGA CCTCACCGCC
ATCGTCCCGC TCCAGGAACA GCCCGGCTTC AAGTTCCGCA CGCCATTCAT CGCCGAAATC
AGAAACGTTC CGTTCCGGCA GCAGGAACAG ATCCTTTTCT TCATCATCGA CCGGCTCCCC
CGCTTCCGCG CCGCGGCGCT GGATGCGCGC GGCAACGGCC ACTACCTGGC CGAAGTCGCC
ATGCAGCGCT ACGGCGCGGG CCGCATCCGC CAGGTGATGC TCTCCGACAA GTGGTACCTC
GAGCACATGC CGTCCTTCCG GTCGGCCTTC GAGGACAAAT CCATCGTCAT CCCCAAAGAC
CCGGACATTC TCGACGACTT GCGCGCAATC CGCCTGGAGC GCGGGGTGGC GAAAGTGCCC
GAACGATATC GCACGCGGGG GCGGGACGGC GGGCAGCGGC ACGGGGACGC CGCCGTCGCC
TGCGCCCTCG CCTGGAGTGC CGCCCGCAGC GGCGACGGCG GCGAAATTGA GTACGAGAGC
GTTGCGGAAA CGCGATTCGC GGCGTCGCGA GGCGCCTGGT GA
 
Protein sequence
MNAERTSRAS LASHGLHAAS PPCSAFDGPP PVLLPYQQRW ISDRSPVKIC EKSRRVGLSW 
SEAADDALTA ASRNGMDVWY IGYNKDMALE FIHDTAFWVR QYRLAASALE EDLVRDEDRD
ILAFRIKFAS SRRVTALSSR PSNLRGKQGK VVIDEAAFHD DLPGLLKAAI ALLMWGGRVA
VISTHNGEDN PFNELVKDIR SGRKPYSLHR ITLDDALAEG LHRRICLKLG TPWSSEAESE
WREELVRVYG EDAEEELFCA PSRGSGLFLA RAVIEGCMDE TVPVFRWACR TDFAELGESV
RQADTRDWCE GLLGPALRDL PENFATWCGE DFGRTGDLTA IVPLQEQPGF KFRTPFIAEI
RNVPFRQQEQ ILFFIIDRLP RFRAAALDAR GNGHYLAEVA MQRYGAGRIR QVMLSDKWYL
EHMPSFRSAF EDKSIVIPKD PDILDDLRAI RLERGVAKVP ERYRTRGRDG GQRHGDAAVA
CALAWSAARS GDGGEIEYES VAETRFAASR GAW