Gene Sfum_1871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1871 
Symbol 
ID4459812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2290178 
End bp2290735 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content65% 
IMG OID639702638 
Producthypothetical protein 
Protein accessionYP_845991 
Protein GI116749304 
COG category[R] General function prediction only 
COG ID[COG3926] Putative secretion activating protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCCA CACGCAATGC GCCGCCCGCA CAACCGGCCC CGCTCGCGGC GGCCGAACCA 
TCCATCCGCG ATCCGAACGA CGGCAAGTTC CGGTTCGCCC TCGAAAGAAC CCTCCTCCAT
GAAGGCGGCT ACGCCCACGA TCCACTGGAC TCCGGCGGCG AGACCCACTT CGGAATCAGC
AAACGCAGCT ATCCCGCGCT GGACATCCGG AACCTGACCC GGGCCGATGC CGAAAAGATC
TACTTTCGGG ACTGGTGGCA GCAACATCGG TACGGCGCCA TCAGCGACAC GGAAATTGCC
GCCAAGGTTT TCGACCTGGC GGTGAACCTC GGTCCGTCGC CCGCTCACAG ACTGCTCCAG
GCCGCCCTGT GCGAAACCCT CGACGGGCCC GTCGTCGTCG TCGACGGCAG GCTGGGCGAC
GCCACCCTGG CCGCGGTCAA CGGCCATCCC GAGCCGCGGT ATCTGCTCGC CGCGCTCAAA
CTCCGTGCGG TCGCACGATA TCTGCAAATC GGCAAAGTCA GGTTCCTGGC CGGATGGATC
AAACGGGCGA TCGCCTAG
 
Protein sequence
MQATRNAPPA QPAPLAAAEP SIRDPNDGKF RFALERTLLH EGGYAHDPLD SGGETHFGIS 
KRSYPALDIR NLTRADAEKI YFRDWWQQHR YGAISDTEIA AKVFDLAVNL GPSPAHRLLQ
AALCETLDGP VVVVDGRLGD ATLAAVNGHP EPRYLLAALK LRAVARYLQI GKVRFLAGWI
KRAIA