| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1862 |
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| Symbol | |
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| ID | 4459838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 2277491 |
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| End bp | 2280100 |
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| Gene Length | 2610 bp |
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| Protein Length | 869 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639702629 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_845982 |
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| Protein GI | 116749295 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.557725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACTT CGCCCGAATT CATGATACCT CGGGGTAGGT TTTGGCAGAG CATCCGGGGC
AAACTTGTTC TCCTTCTCCT GGTTCTGCTC ATCCCGACCG TGCTCGTTCA AGCCTATTCA
TTCCATGACC AACTCAAGGC AAGCCGTGCA CGCGAGTTGC AGGCCAACCT CGAGCTTGCC
CGCGCAGTGG CGAAGACGTT CGAATCGTTC GTGCAGGACG TCCTCCATCA AGAGCTGGCG
CTCGGGCTTG CGATCACTTC TTCCCGGCCC ATGGTCCCGA CGGACATCAC GCGGCTTCTG
GAAAAAAGCC AGCAGGGCTA CGCGGCCGTG CGCGATTTCT CCTGGGTGGA ACCGGACGGC
GTCTTCCGTC ATTCGAGCAA CTCCGCCATG TTGGGGAGAA ACAACAGGGA TCGGGCCTAT
TTTCGCGATA TTCTGAGCGG GCGGCAATGG ACGGTTGGCG AACTGGTCAA GGCAAGGACG
ACCGGCAAAC CGGTCTTTGG CATTTCTAGG GGCATTCGCG ACGAAAGCGG CGTTCTGCTC
GGCGTCGTGG TCGCCACGGT CAGCCCCGAG CAGCTGGACT CGGTGCTCTC GGTCGAGAGA
GGCAAGGGCG GAGGTCTTGC ACTGGTCGAC CACAAGGGCA TGCTGGTCTA TCGATATCCG
GCCATAGACG TCTCGTGGGA AGAGCGCGAA TGGCTCAGGC AGTATCCGGA GTACGTGGAG
GTGTTCAAAG GCAAAGAAAT CACCGCGTCG GTATACGCGG ATTATGAAAA GAGGAGACGC
CTGGTCGGCT TCACCCCGAT TTCATCCATA GGCTGGGCGG CCACCGCCGG GCGCACGGAA
GAGGTTGCCA TTGCGGCGAT CACCTCCACT CTTCTGACTC AGACGGTCAT CTTCCTGGTC
ATCAACCTGG CGGCGTTCGG CGTCGCCCTT CTTTTGTCCC GTTCCATTTC CATCCCGGTA
AAGCGGCTTC GTGACCACGC CCTGGCCATC GGGCGCGGAC AGGGGGGCGA GCCCGCGCCG
GCCGTCGGCC CCGCCGAGCT CGGGGAGCTC GCCGATTCGT TCAACAGGAT GGCCGAGACG
TTGCGGTCCA GGGAAACGAG CCTGCTCGAG GCACAACGAC GCCTGACGGC CATCATGGAC
AGCATCGCCG ACGGCTTCTA CACCCTGGAC CGGGAATGGC GGTTCACGCA CATCAACGAT
GCCGCCCTCG CCTATTTTGG AAAGACGAGG GAGGAGGTGG CCGGGCGTTC CATCCTGGAC
GTATTCCCAG GAGTCGCGGG CAGTGTTTTC GAGGCCGCGT ACCGGCGTGC CCTGGAAACG
GGGGAATCCC AGTACCTGGA AGCCGCGTCG GTGGTCACGG GCCGGATGAT CGAGATCTTC
GTCTATCCCG GTCCCGAACA TTTGACCGCC CTGTTCCGGG ACATCTCGGA GCGCAAGTGG
ATGGAGGAGG AGTTGCGCCG GTCGCGTGAC GAGCTCGAGC GGCGGGTTCT GGAGCGGACG
GCGGAGCTGG TGAACGCCAA TAAGCAGCTG GGAGAGAAGG CGGCTTTGCT CGATCTGGCC
CACGACGCCA TCCTGGTTCG AGATGCGGAT GAGAAAGTCG TCTTCTGGAA CCGGGGGGCC
GAGGAGACCT ACGGCTGGAG TGAAAGCGAG GCACTGGGCA AGCCGGTGCG CGAGCTTCTT
GGAACCCGGT TTCCGCTCCC CTGGGAGCAA ATAAAGGCCA CGCTCCTGAA GGAAAACGGA
TGGGAAGGCG AACTGGTTCA CACCGCCGAG GATGGAAGAC GTGTCGTGGT GAATAGTCGC
TGGGCTCTGC AAAGAGATGG TTCGGGTCAG CCGGTGGGGA TCCTCGAAAT CAATCGCGAC
ATCACCGGCA GGAAGAAAGC CGAGGATGAG CTCAAAGCGT ATGCGGAGCG CCTCGCGCTG
ATCAACCAGG AACTGGAGGA ATTCGCTTTC GTGGCTTCAC ACGACCTCCA GGAGCCATTG
CGCAAGATCA AGACCTACGG CGACCTGCTC CAGAAACGGT GTGCGCCGTG CCTGGACGAT
GCCGGACTGG GTTTTCTCGA AAGAATGCTC CGTTCGGCCG ATCGGATGCG CCGCCTTCTC
AACGACTTGC TCCAGTATTC GAGAGTAGCG GCGAAACAAG AGCCGTTCAA GGAGATTCAG
CTCGGAGAAG TGGTGCGGGA AGCGGCGAAT GTATTTGAGC AGCGGGCGGG CGGGTTGATC
GAAATCCGGA AATTGCCCAC CATCGAAGCC GATGAATCCC AAATGCTGCG GCTCTTTCAA
AACCTCATCG GCAACGCGCT GAAATTTTGC GGCGCGGCAA GCCCTCAAGT CAAAATTTCG
GCAAAGTGCG ACCACAAAGG GGGGTGTGAA ATTCACGTGG AGGACAACGG CATCGGGTTC
GAGCAACACT ATGCGGAACG GATTTTCAAG CCTTTTCAGC GACTGCACGG CCGCGACGAG
TACGAAGGGA CTGGGATGGG GCTCGCCATA TGCCGCAAAA TCGTCGAGCG GCACGGGGGA
AATATCCGGG TCGAGAGCGA GCCCGGGAAA GGCTCCACGT TCATTATCAG ACTGCCCGTG
AGACAGCACG GGCCGGAGGA AAGACATTGA
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| Protein sequence | MATSPEFMIP RGRFWQSIRG KLVLLLLVLL IPTVLVQAYS FHDQLKASRA RELQANLELA
RAVAKTFESF VQDVLHQELA LGLAITSSRP MVPTDITRLL EKSQQGYAAV RDFSWVEPDG
VFRHSSNSAM LGRNNRDRAY FRDILSGRQW TVGELVKART TGKPVFGISR GIRDESGVLL
GVVVATVSPE QLDSVLSVER GKGGGLALVD HKGMLVYRYP AIDVSWEERE WLRQYPEYVE
VFKGKEITAS VYADYEKRRR LVGFTPISSI GWAATAGRTE EVAIAAITST LLTQTVIFLV
INLAAFGVAL LLSRSISIPV KRLRDHALAI GRGQGGEPAP AVGPAELGEL ADSFNRMAET
LRSRETSLLE AQRRLTAIMD SIADGFYTLD REWRFTHIND AALAYFGKTR EEVAGRSILD
VFPGVAGSVF EAAYRRALET GESQYLEAAS VVTGRMIEIF VYPGPEHLTA LFRDISERKW
MEEELRRSRD ELERRVLERT AELVNANKQL GEKAALLDLA HDAILVRDAD EKVVFWNRGA
EETYGWSESE ALGKPVRELL GTRFPLPWEQ IKATLLKENG WEGELVHTAE DGRRVVVNSR
WALQRDGSGQ PVGILEINRD ITGRKKAEDE LKAYAERLAL INQELEEFAF VASHDLQEPL
RKIKTYGDLL QKRCAPCLDD AGLGFLERML RSADRMRRLL NDLLQYSRVA AKQEPFKEIQ
LGEVVREAAN VFEQRAGGLI EIRKLPTIEA DESQMLRLFQ NLIGNALKFC GAASPQVKIS
AKCDHKGGCE IHVEDNGIGF EQHYAERIFK PFQRLHGRDE YEGTGMGLAI CRKIVERHGG
NIRVESEPGK GSTFIIRLPV RQHGPEERH
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