| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1861 |
|---|
| Symbol | |
|---|
| ID | 4459837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 2277075 |
|---|
| End bp | 2277470 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639702628 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_845981 |
|---|
| Protein GI | 116749294 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.123392 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTGATGG CCGATGACGA TGTCGAGGAC TGCATGCTGG CGACCGAGGC CTTCGAAGCC
AGCGGAGCGG CGGGTGCCTT CTCGTGTGTC AAGGACGGGA TCGAGCTTAT GGAGTACCTT
TCGGAGCGCG TGCGATCCGT AGCGGAAGAA CTGCCCGGGC TGATCCTGCT CGACCTCAAT
ATGCCTCGCA AGGACGGCCG CGAGGCGCTC GTGGAAATCA AGGCCGAACC GGCCCTGAAG
CATATCCCCA TCGTCATCCT GACCACTTCC CGGGAAGGCC GTGACATGAC CTTTACCAGG
GAGGCGGGAG CGAACTCGTT CATCACCAAA CCGGACACTT TCGACGAATG GGTCCAAATC
ATGAAGTCAT TGGCTCAGCG TTGGCTTGCA GAGTAA
|
|---|
| Protein sequence | MLMADDDVED CMLATEAFEA SGAAGAFSCV KDGIELMEYL SERVRSVAEE LPGLILLDLN
MPRKDGREAL VEIKAEPALK HIPIVILTTS REGRDMTFTR EAGANSFITK PDTFDEWVQI
MKSLAQRWLA E
|
|---|
| |