| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1851 |
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| Symbol | |
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| ID | 4459827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 2259865 |
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| End bp | 2261565 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639702618 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_845971 |
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| Protein GI | 116749284 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAGA ACACCGGACG CTTCGCACTG CTTCGGCAAT TGCTCGCAGA TGGCGTCACT
TCTTTGTTCG GCAACCCCGG CTCTTCGGAG CAGAACCTCC TCGATGCCCT TCGCGACGAG
GAATTTCAGT CGATCCGGTA CTACCTTTCG CTTCACGAAG GCACCGCGGT GGCCATGGCC
GATGCGTACG CGCGCTCTCT CCGCACCCCT GCCGTCGTGC AACTGCACAG CTACGCGGGC
CTGGCGAACG GCCTGGGCAT GATGTACTAC GCGCGGCGGG GATACACGCC GCTGGTGGTC
GTCGCCGGAG AAGCAGGCCT CAGGTACGAG GCGCTTGACG GACAGATGGC GGCCGACCTC
GTTACGATTG CCAAACCTTT CGTCAAGTCG GACCACAACG GCCCGTGTGC GTGGCGGGTG
GCGGACTCCG GCTCCCTGCT CCGGCTCCTG CGCCGCGCTT TCAAGGCCGC CGCCACTCCT
CCGATGGGAC CCGTCCTTCT CGTTTTGCCC ATGGATGTCC TCGACCAACC GAATACCGAA
CCCATCGTTG CGACCCGGCC CGTATATTCC CGGATTGCGC CGGACGCGGG CGTCATCGGC
AATGCCGCCC GGCTTCTCTC CGGGGCGACG AATCCCCTGA TCTTGATGGG CGACGGAATC
GCGGCATCCA ACGCACAGGA CGAGCTCGTC GCCGTGGCCG AGCGGCTCGG CGCCGTCGTT
TGGGGGGCGA ACTGCTCGGA AGTCAACATG CCGGCGTCTC ACCCGTTGTT TGCGGGTTAC
GGCGGGCACA TGTTCGGGGA AGTCAGCCGG AAATACACGG CTTTGGCCGA CGCGGTCCTG
ATCTGCGGAA CCACCGTGAT GCCCGAAGTG TTTCCGTCGA TCGAAGGGAT TTTCGCCGCG
GATGCCCGGA TCGTCCAGTT CGACCTCAAC ACGAGCGAGA TCGCGAAGAA TTTTCCCGTG
ACGGTAGGGG CCTTGGCCGA CCCGAAACCG GCGCTCGGCA TGCTTGCCAC GGCACTCGAC
GACGTCATGG GGGCGGCTGA AAAGAAAGAG GCCGGCGAGC GGATAAGGCG CATCGAGGCT
CAGAAGCGCC GCGAACGGGA GCAACTTCGG GCAAGCGATG CCGCCGTGCG CGACCGGACG
CCCCTTCGGG CCTCACGCTT CTTCGAGGAT CTTGCCGGCC GGGTGCCCGA CGATGCGCTG
ATCTTCGATG AGGCTCTGAC ACATTCCCCG GAGCTGCTGC GCACTCTGCC CCAGGACAAA
CCGGGCACGT ACTTCCAAAC GCGAGCCGGA ATGCTCGGAA CCGGCCTCCC GGGGGGGCTT
GGACTGAAGG TGGCGCACCC GGACAGGGTG GTCGTCAGCG TCGTCGGCGA CGGGGGAAGC
ATGCAGACGA TCCAGGCGCT GAGCACCGCC GCCCGTCACA ACATCGGGAC GAAATTCGTC
GTGTGCAACA ACCGGAGCTA TCGCATCCTG AAATACAATC TGCGGCAGTA CTGGAAGGAC
CACAACCAGC CAACCGATCA GGCGTTCCCG GACGCTTTCG ACCTTGCGAG GCCGATCCTG
CGCTTCGATA CGTTGGCTCA GGGGCAGGGA GTCGATGCCG TTCGCGTGGA AAAACCGGAG
GAGATCGCTC CGGCCCTGGA CCGTGCGTTT GGCGACGACC GGCCGTTCCT GATCGACGTC
GTTCTCGATT CCGGTTTGTA G
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| Protein sequence | MDKNTGRFAL LRQLLADGVT SLFGNPGSSE QNLLDALRDE EFQSIRYYLS LHEGTAVAMA
DAYARSLRTP AVVQLHSYAG LANGLGMMYY ARRGYTPLVV VAGEAGLRYE ALDGQMAADL
VTIAKPFVKS DHNGPCAWRV ADSGSLLRLL RRAFKAAATP PMGPVLLVLP MDVLDQPNTE
PIVATRPVYS RIAPDAGVIG NAARLLSGAT NPLILMGDGI AASNAQDELV AVAERLGAVV
WGANCSEVNM PASHPLFAGY GGHMFGEVSR KYTALADAVL ICGTTVMPEV FPSIEGIFAA
DARIVQFDLN TSEIAKNFPV TVGALADPKP ALGMLATALD DVMGAAEKKE AGERIRRIEA
QKRREREQLR ASDAAVRDRT PLRASRFFED LAGRVPDDAL IFDEALTHSP ELLRTLPQDK
PGTYFQTRAG MLGTGLPGGL GLKVAHPDRV VVSVVGDGGS MQTIQALSTA ARHNIGTKFV
VCNNRSYRIL KYNLRQYWKD HNQPTDQAFP DAFDLARPIL RFDTLAQGQG VDAVRVEKPE
EIAPALDRAF GDDRPFLIDV VLDSGL
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