Gene Sfum_1849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1849 
Symbol 
ID4459825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2258356 
End bp2259108 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content62% 
IMG OID639702616 
Producthypothetical protein 
Protein accessionYP_845969 
Protein GI116749282 
COG category[R] General function prediction only 
COG ID[COG3631] Ketosteroid isomerase-related protein 
TIGRFAM ID[TIGR03221] muconolactone delta-isomerase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTTCT ATGTCCAAAT GAAGTGGAAC TACCAGGGGC GCATCAGCCA GGATGAGTTG 
TGGAGGCTTG AGGCGCGGGA AGGCGAGCAC GGCCTCGAGG GAATCCGGTC GGGGTTGGTG
AAGGGTCTCT ACAAGGTCGT CTCCCAGCAT CGGGTGATCG CTATCGTGGA CGTCGATTCG
CTCGAAAACC TGGACCGCAA CTCAATGGGA TGGCTGCCGA TGCGCGAATA CCTGGAATTC
GAGCAGGTGT GGGCGCTTCG CGACTATGCC GGGTTCGTCG AGGACGTGAA GGCCGGGTTC
CCGTCTCCTC CACCTCCGGG CGCGACGGCA ACGTCCTCTC CCGACGAAAC GCGCCGCGTG
GCGGTGAGCT GGTTCGACAA TCTCTCGAAA GGGACTTTCG ATGAGGCTCT GAAGCTCGTT
CACCCGGACG TCGTCTGGGA GAACATAGCG CCTACACCCG GGGTCAGCGA TCTTGCCCCC
TGGCTGGGCT CGTACCGGGG GCTGGAAGCG GTCGTCAAGA GTTTCGAGGT CTGGGCGCGA
TACTCGCGCA TGCTGGCGAT GAACCTGCAA CAGCTCACGG TGGAAGGCGA GGACGCGCTG
GCGATCGTGC ATGAGCACGC GCAGTGCCTG GCAAACGGGA ACGAGTACGA CCTGTATGTG
GCCACCAACC TGAAAATCGT CGGCGGCAAG ATCCGGCGCT GGAAGGTGTA CTGGGACCCC
TCGCCGCTCA TTCGGGCGTA CAAGAACCTG TAG
 
Protein sequence
MLFYVQMKWN YQGRISQDEL WRLEAREGEH GLEGIRSGLV KGLYKVVSQH RVIAIVDVDS 
LENLDRNSMG WLPMREYLEF EQVWALRDYA GFVEDVKAGF PSPPPPGATA TSSPDETRRV
AVSWFDNLSK GTFDEALKLV HPDVVWENIA PTPGVSDLAP WLGSYRGLEA VVKSFEVWAR
YSRMLAMNLQ QLTVEGEDAL AIVHEHAQCL ANGNEYDLYV ATNLKIVGGK IRRWKVYWDP
SPLIRAYKNL