Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1846 |
Symbol | |
ID | 4459857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 2253336 |
End bp | 2255054 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639702613 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_845966 |
Protein GI | 116749279 |
COG category | [R] General function prediction only |
COG ID | [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.997362 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAATC ATGCACCGAT CATATTCACG GAAAGGACGG AGTGCCAGGA CTGCTTCAAG TGCATCCGGG AATGCCCCGT CAAGGCGATC AAGGTGGAAA ACGCCTGTGC GGCCGTCATC CCTCAGCTGT GCGTGCTGTG CGGCCATTGC GTGGAGGTCT GTCCCAACGG GGCAAAACAC GTTCGGGACG ATCTCGAACA GGCTCGGCAG CTTCTCAAGG AGAAGGACCA GGTGTTTGCG TCCCTGGCCC CGTCATTTGT GAGCGAGTTT CCGGACATCC CGCCTTCGGC GATCATCCGG GCCTTGAAGA AGCTGGGGTT CGCCGGGGTT TCAGAAACCG CCCTGGGAGC CGAACGGGTT TCGGGCAGCG TTGCCGGGCA ACTTCGGGAC AAGACGCCGC GAGTGATCAT CTCGACGGCT TGCCCGGTGG TGGTGAACTA CCTGGGCAGG TACCACCCCC AGTATGCCGA ATGCCTGTCT CCCTACGTGT CACCCGTACT GGCCCACTGT GAGCTGCTGC GCGAAACCTA CGGGCCGTCC ATCGGCATCG TGTTTTTCAG CCCGTGCATC GCCAAGAAAG GGGAGGCCGA CAACAATTCC CAGCTGCTCG ACATCGCCTT GACCTTCGAG GACATGCGGC ACTGGCTGCA GCTCGAACAA ATCGCTTTCC AGCCGGGTCG CGGCGACGAG GAATCCTTTG TGCCGTATTC GGCCCAGGAA GGAGCGCTTT ATCCCATCGA CGGAGGGATG GTGGCGGGGG TAAAAGCCGG CTGCAGCGTG ATGGAGGCCG AATGCATGTC TTTTTCGGGA ATCCGCAACA TCCAGAAGGC CATGGCCGAT CTGAGCGACA TGCGGCTCAC TCATCCCATC TTCCTCGAGC TCCTGGCCTG CGAAGGCGGT TGCGTCAACG GCCCCAAGGC AAACCGGCGC AAAGGGACCA TCCTGAAGCG CTCCCAGATC ATCCAGTACG CCAGGTATCC CCAGGAGGAA ATCCCACGGC CGCCCACTGC CCCTGTGTGG GGGGACGCAC TGTATCCCGA TCCGGTGCCC AGGCCCGAGT ACAGCGACAA GATCCTGCGG CAGACCCTGC AGGCTGTCGG CAAGTACGGC CCGGAAGACG AGCTCAACTG CGGCGGCTGC GGCTACGACA ATTGCCGGGA GTTCGCCCGG GCGCTGATCG ACTGCAAGGC TGAGAAGGTC ATGTGCGTCG CCTACATGCG CAAACTGGCC CAGAAAAAAA CCAATGCCCT CATGGAGAAG ACGCCGAGCG CCATCGTCCT CGTGGACGAG GAGCTCAAGA TCATCGAATC CAATTACAAC TTCGCGAAAA TCATCGGCCC GGATGCCGAA AACCTCTACG ATGAGCAGCC AGGGCTCGAA GGGATCTTCC TCCACGAGAT CGCCCCGTTC TACTCACTTT TCAAAACCGT TCTCGAAAAG GGCGAGGACA TCCTGAACCG CGATCTGCGC TACAAGAAAT CGGTCCTGCA CATCGATATC TTCTCCATCG AGCAGTACCG GGTGGTTTGC GGCATCTTCC AGGACATCAC CAGCCCCACC ATGCACAAGG AAGCCATGAT TCAGAAAGCC CAGGACGTCA TCAAGAAGAA CCTCGCCACC GTCCAGCAGA TCGCTTACCT GCTGGGTGAA AACGCGGCGG AATCCGAAGT GATCCTCAAT TCCATCATCC ATTCCATGAC ATCGCCGGAG CTGGAATGA
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Protein sequence | MNNHAPIIFT ERTECQDCFK CIRECPVKAI KVENACAAVI PQLCVLCGHC VEVCPNGAKH VRDDLEQARQ LLKEKDQVFA SLAPSFVSEF PDIPPSAIIR ALKKLGFAGV SETALGAERV SGSVAGQLRD KTPRVIISTA CPVVVNYLGR YHPQYAECLS PYVSPVLAHC ELLRETYGPS IGIVFFSPCI AKKGEADNNS QLLDIALTFE DMRHWLQLEQ IAFQPGRGDE ESFVPYSAQE GALYPIDGGM VAGVKAGCSV MEAECMSFSG IRNIQKAMAD LSDMRLTHPI FLELLACEGG CVNGPKANRR KGTILKRSQI IQYARYPQEE IPRPPTAPVW GDALYPDPVP RPEYSDKILR QTLQAVGKYG PEDELNCGGC GYDNCREFAR ALIDCKAEKV MCVAYMRKLA QKKTNALMEK TPSAIVLVDE ELKIIESNYN FAKIIGPDAE NLYDEQPGLE GIFLHEIAPF YSLFKTVLEK GEDILNRDLR YKKSVLHIDI FSIEQYRVVC GIFQDITSPT MHKEAMIQKA QDVIKKNLAT VQQIAYLLGE NAAESEVILN SIIHSMTSPE LE
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