Gene Sfum_1820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1820 
Symbol 
ID4459865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2222414 
End bp2223202 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content64% 
IMG OID639702587 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_845940 
Protein GI116749253 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.107141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGC CTGTTGCACG ACTCGACAAC ATCCAGAAAG AAACGTACAG CCGCAACATT 
CTCGTTTCCG AGATCGGTGA AGCCGGCCAG CTTCGGCTTG CGGAAAGCCG TGTGCTGCTG
GTCGGACTCG GCGGCCTCGG CAGTTCCGCC CTTTGCTACC TGGCGGCCGC GGGGGTGGGG
GAAATCGGCA TTGCCGACGG CGACCGGGTC GACCGAACCA ACCTGCAGCG CCAAATCCTT
CACGGCCCCG CGGACATCGG CCGACCCAAG ACAGAATCCG CGCGGGAAAG CGTTTTGAAG
CTGAGGACCG ACCTGCGGCT CAACCTCCAC CCATTCCGGC TCACCCCCGA AAACGCGGCG
CGGACCATCG CTCCGTACGA CTTCGTGATC GACGCCACGG ACAACTTCGA TGCGAAGTTC
CTCATCAACG ACGTCTGTGT CGGCCAGGGC AAGGCCTTCT GTCATGCCGC CGCCGTCGGC
CTGCACGGGC AGGCCATGAC GATCGTTCCC GGCAAAGGAC CGTGCTACCG GTGCGTTTTC
CAGGAAAAGC CGCCCGCGGA AACGGTCGAA TCGGCGGACC GGGTGGGCGT GCTCGGCTGC
GTCCCCGGCG CACTCGGTAT CATTCAGGCA GCGGAAGCCA TCAAGTACCT GGTCGGCTGC
GGGGATCTCC TTGTCGGCAG GCTGCTCACC TGGGACCTGC GGACCATGGC TTTTCGTGAA
ATCGGCCTGC CGCTTTCCAA GCGGTGCAAG GCATGCGACT CAAACCGACA CTCTCGTCCG
GAAAGGTAA
 
Protein sequence
MAQPVARLDN IQKETYSRNI LVSEIGEAGQ LRLAESRVLL VGLGGLGSSA LCYLAAAGVG 
EIGIADGDRV DRTNLQRQIL HGPADIGRPK TESARESVLK LRTDLRLNLH PFRLTPENAA
RTIAPYDFVI DATDNFDAKF LINDVCVGQG KAFCHAAAVG LHGQAMTIVP GKGPCYRCVF
QEKPPAETVE SADRVGVLGC VPGALGIIQA AEAIKYLVGC GDLLVGRLLT WDLRTMAFRE
IGLPLSKRCK ACDSNRHSRP ER