Gene Sfum_1819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1819 
Symbol 
ID4459864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2221014 
End bp2221682 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content61% 
IMG OID639702586 
Productglutamine amidotransferase class-I 
Protein accessionYP_845939 
Protein GI116749252 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.110489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTTA TCGTTCAGAA TGATCCGGAG GTGCCCTGCG GGGTTCTCCC CGAGCTGGCG 
GAACAGAAAT GTATCGGGTA CGAAATTGTG CCGGCTTTTG AAGGCGTCGA GTATCCCGAA
GTGCATGGAA TCCGCGGTGC AGTTGTGTTG GGCGGCAAAA TGAGCGTGCA CGATATCGCG
ATCCACCCGT TCCTGGACCG CGTGAAAAAG TACATCGGAA GACTTCTGGC TGATGCCGTT
CCATTCCTGG GGATCTGCCT GGGGGGGCAG TTGCTGGCGG AAGTCCTGGG GGCCCGGGTT
TGCAGAAACT CGCATGGAGA ACGCGGCTGC CGGACGGTTT CAGTCACTTC GCAGGGATTG
GCGAGTCCGC TCTTCCGGGG TCTCCCCGAA CGTTTCGTCA CCTTCCAGTG GCACGACGAT
TCTTTCGACC TGCCGGAAAG CGCCGTCCGC CTCGCGCGTT CCGAATCGTG CTCGAATCAG
GCCTTCGAAT GGGGTGGGAA CGCATACGGG CTCCAGTTTC ACCCGGAGGT CGACGGCCGG
ATCGTAGCCG CCTGGAGCGA CGGCGATGAG CGCCATGTGC GGGAATTTGC CGACCGGGAG
GGGCACTATC GGGCCCACTC GCGACGCCTG CTCGAGAATT TTCTGGATAT CGTCCTCCGC
TGCCGATAA
 
Protein sequence
MIVIVQNDPE VPCGVLPELA EQKCIGYEIV PAFEGVEYPE VHGIRGAVVL GGKMSVHDIA 
IHPFLDRVKK YIGRLLADAV PFLGICLGGQ LLAEVLGARV CRNSHGERGC RTVSVTSQGL
ASPLFRGLPE RFVTFQWHDD SFDLPESAVR LARSESCSNQ AFEWGGNAYG LQFHPEVDGR
IVAAWSDGDE RHVREFADRE GHYRAHSRRL LENFLDIVLR CR