| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1812 |
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| Symbol | |
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| ID | 4459891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 2211762 |
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| End bp | 2213504 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639702579 |
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| Product | hydroxymethylbutenyl pyrophosphate reductase |
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| Protein accession | YP_845932 |
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| Protein GI | 116749245 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.254631 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTGC TTGTGGCCAA GACTGCCGGT TTCTGCAAAG GGGTCAGAGA CGCCCTGGAA
GTGACCCTCG GAGCGATCAA GAACCAACAG GACGGGGAGA ACATCTGCAC GTTCGGGCCG
CTGATTCATA ACCGGCAGGT TCTGGCCATG CTGGAAGCCA AAGGGATCCG GGAGGTGAAC
GAAATCGAGG GTTGCGCGGA CCGCAAGGTG GTCATCCGCG CTCACGGGAT ACCGCCCGAG
ACTCGACAGA CCTTGCACCG GCTGGGGGCA ACCCTGCTGG ACGCCACCTG CAAGCGCGTG
GCGAAGGTGC ACGCGGCCAT CAAGCGGCAT GCGCGCCGCG GCTATTACAC CGTCATCGTG
GGTGACGCCG ATCACGCCGA AGTGATCGGC CTCATGGGCT ATACGGAAGG CAGAGGCGTG
GTCATCAACC GCGTCGAGCA GCTCAACGAG CTGCCGGCGG AATGGGAGAA CGTGCTGCTC
GTTGCCCAGA CCACCCAAAA CGAGGAAGTG TTCCAGGAAA TCCAGGAAGA GTTCCTCAAG
AAATACCCCA AGGGCAAGGT CAAGAATACC ATTTGCGATT CAACCCATGA ACGTCAGACC
GAGGTCCGTG AGATGTGTTC CCTGGTCGAG GCCATGGTGA TCGTGGGCGG CTTTCACAGC
GGAAACACGC TGCGGTTGGC CCAGGTCGCC AGGGAATGCG AAATCCCCAC CTACCACGTG
GAAACGGAAG CGGAGCTCAA CCCCCAGGAA CTGGCGAAGT ACTCCCGTGT GGGAGTGTCC
GCGGGAGCTT CCACGCCCAA CTGGCTCATT CGCAATGTGG TCCGGTTCCT GGAATCCATC
CGACCGGAGC AGCCGGAGCC GCGATTCAGC GTGAAGAAGA CGCTGGAGCT TCTCGCTTAC
GCCAATTTTT CGGTAGCCCT GGGCGCCGCC CTGTTATCCG CCGCGGCCCA GGCGCTGAGC
GGGCTCCCCG GCTCCTGGAC CTACTCGCTC ATGGCCGCCT GCTACGTCTA CGCCATGCAT
TCCCTCAACA TTTTCCTGGA CCGGAACGCC ATACAGCTCA ACGACCCGCG GCGCGCGGAG
TTCTATGAGC GGTGGCGCCT GACCTTCATG AGCACCAGCA CCCTTGCGGT GGTGCTCGCG
CTGGGCCTCG CCCTGGCCCA CGGGTTTCTG CCGTTTGCGG CCATGGTTGT CCTCGTGCTG
CTCGGGTCGC TGTACGCCGT GCCCCTCATC ATCCCGGCGG GCTGGCGCGG TTCATCGGTC
TTCAAAATCA AAGACATTCC CACCTCCAAA ACGTTTTTTG TGCCGATCGC CTGGGCGTGC
GTGATCGTGC TCGTGCCTCA CCTGTGGGGA CTGCGGGAAT CTTTCGGTCC GCTCGTATAC
GCTTCCTGGG TGGTTTTTCT CATGGTGCTG ATTCGCACCA CCCTTCTCGA CCTCATCGCC
GTCCAGGGAG ATCGGATCGT CGGCAAGGAA ACCCTGGTTG TGCTCATGGG GGAAGTCAGG
ACCTCCCGAT TCACCAATGC CGTGTTCGGA TTGCTGAGCC TGTCGCTGCT GCTGGGACCG
GTTTTGGGCC TGGCATCGTG GTTCGCCTGG GCGCTGATCC CTGCCGTGGC CGCCTACTGG
TGGTATCTCC ATGTCGGTTC GAAACGGCGC CTCAAGGAGG ACCCGGTGTT CGAGAGCTAT
ATCGAATTCA TGCTCATCGG TTCCGGCGCC CTGGGCATGG TCTGGAACCT GGCGGCGGGT
TGA
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| Protein sequence | MKVLVAKTAG FCKGVRDALE VTLGAIKNQQ DGENICTFGP LIHNRQVLAM LEAKGIREVN
EIEGCADRKV VIRAHGIPPE TRQTLHRLGA TLLDATCKRV AKVHAAIKRH ARRGYYTVIV
GDADHAEVIG LMGYTEGRGV VINRVEQLNE LPAEWENVLL VAQTTQNEEV FQEIQEEFLK
KYPKGKVKNT ICDSTHERQT EVREMCSLVE AMVIVGGFHS GNTLRLAQVA RECEIPTYHV
ETEAELNPQE LAKYSRVGVS AGASTPNWLI RNVVRFLESI RPEQPEPRFS VKKTLELLAY
ANFSVALGAA LLSAAAQALS GLPGSWTYSL MAACYVYAMH SLNIFLDRNA IQLNDPRRAE
FYERWRLTFM STSTLAVVLA LGLALAHGFL PFAAMVVLVL LGSLYAVPLI IPAGWRGSSV
FKIKDIPTSK TFFVPIAWAC VIVLVPHLWG LRESFGPLVY ASWVVFLMVL IRTTLLDLIA
VQGDRIVGKE TLVVLMGEVR TSRFTNAVFG LLSLSLLLGP VLGLASWFAW ALIPAVAAYW
WYLHVGSKRR LKEDPVFESY IEFMLIGSGA LGMVWNLAAG
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