Gene Sfum_1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1808 
Symbol 
ID4459886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2205629 
End bp2207614 
Gene Length1986 bp 
Protein Length661 aa 
Translation table11 
GC content61% 
IMG OID639702575 
ProductK+ potassium transporter 
Protein accessionYP_845928 
Protein GI116749241 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3158] K+ transporter 
TIGRFAM ID[TIGR00794] potassium uptake protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.223984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.703155 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGGC TTTTTCCCGC CGGCGGGGGT AATCCGCCTT CCTCGTATTT ATCCCGATTC 
TTGCCGCATC GCAAAGAGCG CTCCCCGGAG AATGTCACAT CCGGTCGCAA CGGTGTTCCA
CATCGGGGCA GAATGCTTTC ACTGGCCCTT GGAGCCCTCG GGATCGTTTA CGGGGACATC
GGCACGAGTC CGTTGTACAC GATCAAGGAG TGTTTCCACG GAACTCACGC CATCGCGCCC
AACCCCGCCA ATATCATGGG GGTCCTTTCG CTGATCCTGT GGTCCCTGAC CATGGTGGTG
AGCATCAAGT ACATCACGTT CATGATGCGG GCGGACAACC GGGGCGAGGG AGGGATCTTC
GCTCTGCTGG CCCTGGTCCC GATGTCGGGA AAGCTGATCT CCAGGGGCGC CCGCGCCGTG
GTGGTGATGG CCGCCCTGAC CGGTGCGGCC CTGCTGTACG GCGATGGTTT CATCACGCCT
TCGATCACGG TACTGTCCGC CATCGAAGGC CTGGAGGTGG CCACCGATGC GGCGAAGAAC
CTCATCGTGC CGCTGGCCTG CGGCATCCTG CTCGGCCTTT TCCTTGTACA ATCACGGGGC
ACCGCAAAAA TCGGCAGGAT TTTCGGACCC GTCATGCTGG TCTGGTTCGC AACCATCGCG
ACGCTCGGCC TCCTGTGTAT CGTTCGGAAT CCGGTGGTGC TGGATGCGGT CAGCCCAGTC
TACGCATACC GCTTCTTTGC CGAACACCAC GTGCACGGGC TGGTGGTTCT CGGCTCGGTG
GTTCTGAGCA TCACCGGCGG AGAAGCCCTG TACGCGGACA TGGGACATTT CGGCCGCGTT
CCGATCCGCC TCTCCTGGTT CGCCATGGTG TTTCCGTCCC TGCTGCTGAA CTATTTCGGC
CAGGGCGCGG CACTCCTCGA ACAGCCGGAC CTGGCGTTCA ACCCGTTCTA CGGTTTGGTG
CCGCGGGTAC TGCTGCTGCC CATGGTCGCC CTGGCCACCA TGGCGTCCAT CATCGCGTCC
CAGGCGATGA TTTCCGGGGC CTTCTCGTTG ACGCGCCAGG CCGTGCAATT GGGCTACATT
CCCCGGGTCA CCATCGTCCA CACTTCGGCG GAAACCGAGG GGCAGATTTA CATCCCGGAG
GTGAACCGTT TGATGATGGT CGTCTGCATC GGGCTGGTGC TGGTTTTCCG GGCTTCCAGC
GGCCTTGCGG GGGCATACGG GGTCGCGGTG ACGGCGAACA TGGCGATCAC ATCGGTGGTC
TACTTTTTCG TGGCCACCCG CACCTGGGGA TGGTCGACGG CGAAGACCGC TCCTCTGGTC
GGGCTGTTTC TGGTTTTCGA CATCACCTAC TTCGGCTCCA ATCTGCTGAA GTTTTTCGAC
GGCGGATGGT TTCCCCTGGC GGTCGCGCTG GTGATCGTGA TCGTCATGGC ATCCTGGAAG
GACGGGCGGG CCGAGCTCTA CAAACACATC GTGAAGTCCT CGCCGACACT CGATATGTTT
CTCGAGGACG TCTCCCGGCA CAACGTTCAC CGGGTGGCGG GAACCGCGGT CTTCATGGCG
TCCACGTCCT CCTTGACGCC GCCTTCGCTC ATGCACCACT TCAAGCACAA CAAGGTCCTG
CACGAGGAAG TCATCCTGCT GACCATCGAA GTGACACATA CGCCCCAGGT GCCCGCCGCG
GAAAGGATCA GGGTCGAGGA ACTGGGTGAG GGGTTTCACC GTATCGTGGC CCGGTTCGGG
TTCATGGAGA CGCCCAACGT CCCGCAGATC ATGGATTCCG CTTACCGGGC CCGGCTGGTT
CCGCAAGTTC TGCCCGTGAG CTACTACCTC GGCCGGGAGA CGCTGATCCC GTCGGGGCCT
TCCCGAATGA TGCCCTGGCG CAAACGGTTG TTTGCGTTCC TGTCGCGAAA TTCTCAAAGC
GCCACCAACT ATTTCGGGCT GCCCCCCGGT CAGGTTGTTG AGCTGGGAGT GCAGATCGAG
TTTTGA
 
Protein sequence
MKGLFPAGGG NPPSSYLSRF LPHRKERSPE NVTSGRNGVP HRGRMLSLAL GALGIVYGDI 
GTSPLYTIKE CFHGTHAIAP NPANIMGVLS LILWSLTMVV SIKYITFMMR ADNRGEGGIF
ALLALVPMSG KLISRGARAV VVMAALTGAA LLYGDGFITP SITVLSAIEG LEVATDAAKN
LIVPLACGIL LGLFLVQSRG TAKIGRIFGP VMLVWFATIA TLGLLCIVRN PVVLDAVSPV
YAYRFFAEHH VHGLVVLGSV VLSITGGEAL YADMGHFGRV PIRLSWFAMV FPSLLLNYFG
QGAALLEQPD LAFNPFYGLV PRVLLLPMVA LATMASIIAS QAMISGAFSL TRQAVQLGYI
PRVTIVHTSA ETEGQIYIPE VNRLMMVVCI GLVLVFRASS GLAGAYGVAV TANMAITSVV
YFFVATRTWG WSTAKTAPLV GLFLVFDITY FGSNLLKFFD GGWFPLAVAL VIVIVMASWK
DGRAELYKHI VKSSPTLDMF LEDVSRHNVH RVAGTAVFMA STSSLTPPSL MHHFKHNKVL
HEEVILLTIE VTHTPQVPAA ERIRVEELGE GFHRIVARFG FMETPNVPQI MDSAYRARLV
PQVLPVSYYL GRETLIPSGP SRMMPWRKRL FAFLSRNSQS ATNYFGLPPG QVVELGVQIE
F