Gene Sfum_1797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1797 
Symbol 
ID4459909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2193843 
End bp2194649 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content58% 
IMG OID639702566 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_845919 
Protein GI116749232 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.812757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.948328 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGACG AGATCAAGGC AAGAGTGCAA GAGCTCCTGG CGTCCGGCAA GATCAAAGGA 
TTTCTCGGCC TTCGGGAGAT GCACGGTCAG GTCGGGCCAT ATCTTTTCAC GGATGGAAGC
GACCTCGACG GACTGGTCGC GGGCGATCGA AAGAGTCCCG GCGACAGCCG TTACCCTCTC
AACCGGCAAC TCATGATGAT CGCCGGTCAT TATCCGAAGG AGACGTTCGG AGTTTTGATT
CGAGGCTGCG ATGAGCGCGG CTTGAAGACG CTTTTCAGCT CCAATCAGCT CATTCCTGAA
AAGGTCGTCC CGGTGGGCAT TGCCTGTCCC CAGGAACTGG CCGATGCCTG TGAATGCATG
AAACCTTTCC CCGACGAATA CGTTGCCGGC GAACCCGGCG AGGGGCGTCC GTTCGGAACG
GTCGAGCGCA TTGAATCGTT GGCGCTCGAC GAGCGGTTCG AGCTTTGGAT GGCCGAATTC
GCCAAATGCA TCAAGTGCTA CGGTTGCCGG AATATCTGCC CGATGTGTTA TTGCAGGGAG
TGTACGCTGG AGAGCAAGGA TTTTGTGAAC ATCGGCAGCC TTCCCCCGGA AAGCCCTATC
TTCCACCTGA CGCGCGCCGT GCACATGGCG GGCAGATGCA TCGACTGCGG GCTGTGCAAT
GAAGCCTGTC CCGCGGGTAT CCCCGTCCGG ACCTTGTACA AGAAGGTTGC CGACATCGTC
CAGCAGGAAT TCAATCTTCG GCCGGGGTAT GATAGTCCAA ATGCCGAGCA ATCCTCCAGC
AGCCTCGGTG AAGCTGCAAG ACACTGA
 
Protein sequence
MVDEIKARVQ ELLASGKIKG FLGLREMHGQ VGPYLFTDGS DLDGLVAGDR KSPGDSRYPL 
NRQLMMIAGH YPKETFGVLI RGCDERGLKT LFSSNQLIPE KVVPVGIACP QELADACECM
KPFPDEYVAG EPGEGRPFGT VERIESLALD ERFELWMAEF AKCIKCYGCR NICPMCYCRE
CTLESKDFVN IGSLPPESPI FHLTRAVHMA GRCIDCGLCN EACPAGIPVR TLYKKVADIV
QQEFNLRPGY DSPNAEQSSS SLGEAARH