Gene Sfum_1795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1795 
Symbol 
ID4459907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2191794 
End bp2193374 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content62% 
IMG OID639702564 
Productmolybdopterin oxidoreductase 
Protein accessionYP_845917 
Protein GI116749230 
COG category[R] General function prediction only 
COG ID[COG3383] Uncharacterized anaerobic dehydrogenase 
TIGRFAM ID[TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.727225 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACT CCATCGCTGA ACTGGAGGAT TCGGACTGCA TTCTCGTGAT CGGCTCCAAC 
ACCACGTCGT CTCATCCCCT GGTGGCGACA CGGATTTTTC GCGCCAAGGA AAAAGGTGCG
AAAGTGATTG TCGCGGACCC GCGCAACGTT CAACTGGTGA AAAAGGCCGA CCTGCACATA
CGGCACAACC TCGGCACCGA CGTCGCGCTG GTGAACGGGA TCATGCACGT CATCCTGGCC
AGGGGCTGGC ACAACCAGGC TTTCGTGGAC GAACGGACCG AGGGGTTCGA AGAGTTCCGC
AAGGTGATCG AGCAGTACAC CCCGGAGCGC ACCGCGGAGA TCACCGGTGT CCCGGCCGAG
GACATCATCA CGGTCGCCGA CTGGTATGCC AACGCTCGAG CCGGCTCCAT CGTCTACTGC
ATGGGGATCA CGCAGCACAC GACGGGTGTG GACAACGTCA AGAGCCTGGC AAACCTCTCC
ATGCTGACGG GCCACATCGG GCGGGAATCG ACCGGCGTCA ACCCCTTGCG CGGCCAGAAC
AACGTGCAGG GAGCCTGCGA CATGGGCGGC CTGCCGAACG TCTATCCGGG ATACCAGCCG
GTGAACGTTC CGGCCAACAA GGAGAAGTTC GAGGCGGCCT GGAACGCGAA GCTCTCCGAC
AAGGTCGGGT TGACCATCCC CGGCGTGCTC GAAGGACTGA GCGCGGGCAC GGTGAAGGCG
GCCTACGTGG TGGGGGAAAA CCCCATGATG AGCGATCCTG ACGTACATCA CGTGGAGAAG
GCCCTGCGCA ACGCCGAATT GCTGGTGGTG CAGGACATCT TCCTCACGCC GACGGCCGAA
CTGGCCCACG TGGTGCTGCC CGGGGCGTCG TTCGCCGAAA AGGACGGGAC CTTCTCGAGC
ACGGAAAGAC GAGTACAAAG GGTGCGGCAG GCGGTCAAGC CGGTGGGCGA TTCCCGTGCG
GACTGGGAGA TCCTCCAGGA GGTGTCCACG CGATTCGGCT ACCCCATGAA GTATGCGTCG
CCTGCGGAGA TCATGGAGGA AGTCGCCCGG ATGACCCCTT CCTACGGAGG CATCACTTTC
GATCGCCTGG AAGGGGACGG ACTTTGCTGG CCGTGTCCGA CCGCGGACCA TCCCGGCACG
AAATTCCTGC ACGCAGGAAA ATTTTCAAGG GGCCTCGGCC TCTTTCACGC CATCGAGTAC
AAACCGCCCG CGGAAGTGGT CGACAGCGAG TTCCCGTTCT GGCTCACCAC CGGGCGAGTG
CACGTCCACT ACCACACCGG GACCATGACT CGCAATTCAC CATCCCTTCA CCAGGAAATG
CCCGAGGGGT TCCTCGAGCT CAATCCTCAG GATGCGCAGG AACTCGGCGT GAAATCGGGC
GACAGGGTGC GGGTGGTTTC CAGGCGAGGA GAGATGGTCA CGCGGGTGGA CCTGACCATG
CGGGTCAGGC AGGGAATGGT GTTCATGCCG TTCCACTTTA TCGAAAGCTG TGCGAACCTT
CTCACCAATT CGGCCCATGA TCCCATCGCC AAGATCCCCG AATACAAGGT GTGTGCGGTG
TCACTGGAAA GGGCCGTGTG A
 
Protein sequence
MTNSIAELED SDCILVIGSN TTSSHPLVAT RIFRAKEKGA KVIVADPRNV QLVKKADLHI 
RHNLGTDVAL VNGIMHVILA RGWHNQAFVD ERTEGFEEFR KVIEQYTPER TAEITGVPAE
DIITVADWYA NARAGSIVYC MGITQHTTGV DNVKSLANLS MLTGHIGRES TGVNPLRGQN
NVQGACDMGG LPNVYPGYQP VNVPANKEKF EAAWNAKLSD KVGLTIPGVL EGLSAGTVKA
AYVVGENPMM SDPDVHHVEK ALRNAELLVV QDIFLTPTAE LAHVVLPGAS FAEKDGTFSS
TERRVQRVRQ AVKPVGDSRA DWEILQEVST RFGYPMKYAS PAEIMEEVAR MTPSYGGITF
DRLEGDGLCW PCPTADHPGT KFLHAGKFSR GLGLFHAIEY KPPAEVVDSE FPFWLTTGRV
HVHYHTGTMT RNSPSLHQEM PEGFLELNPQ DAQELGVKSG DRVRVVSRRG EMVTRVDLTM
RVRQGMVFMP FHFIESCANL LTNSAHDPIA KIPEYKVCAV SLERAV