Gene Sfum_1746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1746 
Symbol 
ID4459928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2137360 
End bp2139204 
Gene Length1845 bp 
Protein Length614 aa 
Translation table11 
GC content60% 
IMG OID639702515 
Producthypothetical protein 
Protein accessionYP_845868 
Protein GI116749181 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000631337 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00120069 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTAAATG GCTTTGAAAA AACCCGAACG CAAGCGTTCG AGCAGGGCGA ATCGCCAAGG 
AATCGTCTAA GAGGAGAAGT ACCGATGAAT AGAAAAGTCT TGTTAGGGTA TTTGCTTATT
CTCGCTCTGG TGCTGTCGGG TCCGTGCGCG CCGGCGGCCT GGAGCGCCGA GTCGCAGGCC
GGGCCCGTAA AGGTCGCGGT TCTGCCGTTC ACCATGCATG CCCCGAGCGA CCTGGCTTAC
CTGCAGAGCG GCGTCCGGGA CATGCTCACT TCCCGTCTCG CCTGGCAGGG AAAGGTCCAG
GTTCTGGACC GCTCGGTGAC GGACCAGGCG GTCCGCTCGC CCAAGTCCGA CCTGTCCCCG
GCCGAAGCCA TGAAGATCGG CAATACGCTC AGGGCCGACT ACGTGCTCTA CGGGAGCATC
ACCGCACTGG GACAGGCGAT CAGCATCGAT GCGCGGATGG TGCCGGTGAG CGGAAAGGGC
GACCCGATCA GCCTCTCCAC ACAGGCCAAA ATGGATGAGG TCATCCCGCA GATCAACGCC
TTCGCCCAGC AGATCAACCA GAAAGTTTTT GCCAGGCCGG GCGAAAAGGT CCAGGAAGCC
GCCGCCGGCG AAGCCGAGCT CCTCGCCACC CGCAACCCCG AGTTCCTGGT GGCCGGGACC
ATGATGAGCT CCGACAAGAT TTCCTATTTG AATCCCAATT TCATCGAGGT GACTCCCGAT
GGGGCGCTGC GACAGTCCGG GCTCTGGGCG AGCCAGACCC TGCAGGGCGG GATCCTCGGA
ATGGATATCG GCGACCTCGA CGGCGACGGA CGCGTGGAAA TGGTCGCCAT CACCCACGAC
AAACTGACCG TCTACCGCAA GGAATACCAG GGACTCAAGG TCGTCGCCAT GCACAGCGGT
CTCAAGATCG ACCGTTTTGT CTGGGTTTGC GTTGTCGACA TGGCCCGGGA GGGCAGAGGC
AAGATCTTCG TCACCAACCT GCGCAAGCGC AACACCACAT CGACGGCCCA GACCGACTCC
GCCAAGGGAA GCATGGGCTT CGTGCAGGAC GTTTCTTCCT TTGTGCTCAG CTTGGAAGGC
GGGAAGCTGC AGATGGTGGC CCAGAATGTT CCCTACCTGC TCAACGCGGT GAACATGGGC
ACCAGGGGCA AAATCCTGAT CGGTCAGGAG AAAGGCGGCA CGTCCGACAA GGCCTTCAAG
GGCGACGTGT ACGAAATGGC TCTGCGCGGC AATTCCGTGG TCCCCATGGG CTCGGCGAAC
CTGCCGAAAC GGTGCAATGT TTTCAACTTC GCCAAGGCGG ACATCAACAA CGACAAGATG
GATGAGATCA TTCTTGTCGA TTCGTCTCAC AATCTCATCA TCCTGAATAC GGCCGGCGAC
CAGATCTGGA AGAACTACAG CGTATATTGC GCTACCACGA ACACGTTCGA GGGCAAGGTG
GAAGACCGCC GGTACAACAT GGTCGAGATG GCGGTCGTCC CGTCGCCGAT CCTGGTCACC
GACATCAACA AGGACGGCAT CCCCGAAATC GTGCTCACCA GGAACACCAC CGCCGCGGAC
AAGTTCCTCC CCGAGTCGAT GAAATTTTAC GACCGGGGCG AGATCGTCTC CTTCTCGTGG
GATCAGCTCG GCATGGTCGA GAACTGGAAG ACGCGCGACA TCAACGGCAT GGTTACCGCG
CTCCGGATCG GGGACTTCAG CGGGGACAAC ACGCAGCAAC TCGTGGTCAG CCAGGTGAAC
GCGAAGGACT TGCTCAAGGT ATACGACTCC AGGAGCACCA TCTTCAGCTA CAGCCTGAAC
GTCGCCGCCA AGCCCGACGC GGAGAAACAG GCAAAGAAAC AGTAG
 
Protein sequence
MVNGFEKTRT QAFEQGESPR NRLRGEVPMN RKVLLGYLLI LALVLSGPCA PAAWSAESQA 
GPVKVAVLPF TMHAPSDLAY LQSGVRDMLT SRLAWQGKVQ VLDRSVTDQA VRSPKSDLSP
AEAMKIGNTL RADYVLYGSI TALGQAISID ARMVPVSGKG DPISLSTQAK MDEVIPQINA
FAQQINQKVF ARPGEKVQEA AAGEAELLAT RNPEFLVAGT MMSSDKISYL NPNFIEVTPD
GALRQSGLWA SQTLQGGILG MDIGDLDGDG RVEMVAITHD KLTVYRKEYQ GLKVVAMHSG
LKIDRFVWVC VVDMAREGRG KIFVTNLRKR NTTSTAQTDS AKGSMGFVQD VSSFVLSLEG
GKLQMVAQNV PYLLNAVNMG TRGKILIGQE KGGTSDKAFK GDVYEMALRG NSVVPMGSAN
LPKRCNVFNF AKADINNDKM DEIILVDSSH NLIILNTAGD QIWKNYSVYC ATTNTFEGKV
EDRRYNMVEM AVVPSPILVT DINKDGIPEI VLTRNTTAAD KFLPESMKFY DRGEIVSFSW
DQLGMVENWK TRDINGMVTA LRIGDFSGDN TQQLVVSQVN AKDLLKVYDS RSTIFSYSLN
VAAKPDAEKQ AKKQ