| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1728 |
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| Symbol | |
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| ID | 4459945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 2114049 |
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| End bp | 2114786 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639702497 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_845850 |
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| Protein GI | 116749163 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.229172 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAAA CGCCTGGTCC CGGCAAGTCC ATCGCCATCG ACAAGCGCAT CATTTTCGCC
CTGGATGTGG AGTCTCCGAA AACAGCCCGG GAGTGGGTGA GGCGGCTGGA GGGAGATATC
GGTTTCTACA AGGTCGGGCT GCAGCTGTTT CTCGCCGGAG GGTTCGGCAT CATCGACTGG
ATCGTCAAGC GGGGCATGGA AGTGATGGTC GATCTCAAGT TCTTCGACGT GCCTCAGACC
GTTGCTTCCG CGGTATCCCA ACTCAGGGAC AGGGGCATCT CCCTGACGAC CGTCCATGGA
AACGACGCCA TCCTCGAAGC GGCGGTGACG GCCGGATACG ACGTCAAGAT CCTGGCGGTG
ACCGTTCTGA CCAGCCTGGA TGAAGGCGAT CTACGGGATC TCGGTTTTCA ATGCTCTCCC
GAAGAGCTTG TCCTGTCCAG GGCGCGACGG GCACTCCGGA TCGGTTGCGC CGGCGTGGTG
TCTTCCGGCC TGGAAGCATC CCGGCTCAGA CACGAGCTGG GCGACAGATT CCTGGTGGTC
GTTCCGGGAG TCAGGCCGGT GGCCAACCGG GCGGACGATC AGAAACGCGT GGTGGACGTG
CGCGCGGCAT TTCTGAACGG TGCGGACTAC ATCGTCGTCG GCAGGCCCAT CCGCCAGGCC
GCGAACCCGC ATGAGCTCGT GGCGGGCATG AAGGTTTCCA TTAAAGAAGC TCTGGAGGCG
CGCGAGGCGG GAGGTTGA
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| Protein sequence | MSQTPGPGKS IAIDKRIIFA LDVESPKTAR EWVRRLEGDI GFYKVGLQLF LAGGFGIIDW
IVKRGMEVMV DLKFFDVPQT VASAVSQLRD RGISLTTVHG NDAILEAAVT AGYDVKILAV
TVLTSLDEGD LRDLGFQCSP EELVLSRARR ALRIGCAGVV SSGLEASRLR HELGDRFLVV
VPGVRPVANR ADDQKRVVDV RAAFLNGADY IVVGRPIRQA ANPHELVAGM KVSIKEALEA
REAGG
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