| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1711 |
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| Symbol | rho |
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| ID | 4459963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 2091290 |
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| End bp | 2092603 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639702480 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_845833 |
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| Protein GI | 116749146 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000145962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.971448 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACG ATGTATCGAC CCCGGACACT CACCAGAAAG ATCAGGACGC GCGCGATCGC
AACGAGATGA ACCTGGTCGA GCTGAAAAGC AAGAACATCA GGGAACTGAT GACGATTGCC
AAGGCGCTGA ACATAGAGGG AGCGAGTTCC ATGCGCAAGC AGGAACTGAT CTTCGCTCTG
CTGCAGGCCC AGGCCGAGAT GAGTGGATTG ATCTACGGGG AAGGCGTGCT GGAAATCCTT
CCGGACGGGT TCGGTTTCTT GAGGAGCCAG AACTACAACT ACCTGCCCGG TCCCGACGAC
ATCTATGTTT CGCCGTCCCA AATCCGACGT TTCAACCTGC GGACGGGCGA CAGCGTTTCC
GGGCAAATTC GCCCCCCCAA GGACAACGAA CGCTATTTTG CCTTGCTCAA GGTGGAGGCC
GTCAACTACG AGGATCCGGA TGTCGCGCGG GACAAAATCC TCTTCGACAA CCTCACCCCG
CTTTACCCGG ATCGCCGCGT CAGGCTGGAA AGCATCGCCG ACAACCTGTC CACTCGGGTC
ATGGACCTGC TGACTCCCAT CGGTTTCGGA CAGCGCGGCC TGATTGTCGC GCAGCCGCGA
ACCGGTAAAA CCATGCTGCT GCAAAACATC GCCAACGCCG TCACCGTCAA TCACAAGGAA
GCCTATCTCA TCGTGCTGCT CATCGATGAG CGCCCTGAGG AAGTGACGGA CATGCAGCGC
AACGTGCGCG CCGAGGTGGT CAGTTCCACC TTCGACGAAC CGCCCCAGCG ACACGTGCAG
GTGGCCGAAA TGGTGAGCGA GAAGGCCAAG CGCCTGGTCG AACACAAGCG CGACGTGGTC
ATTCTGCTGG ACAGCATCAC GAGGCTGGCT CGCGCGTACA ACAGCGTTGT CCCGCCGAGC
GGGAAGATCC TTTCCGGAGG TCTCGATTCG AACGCGCTCC ACCGGCCGAA ACGCTTCTTC
GGAGCGGCAC GCAACGTGGA ACAGGGAGGC AGCCTCACCA TCATCGCCAC GGCCCTCATC
GACACCGGCA GCCGAATGGA CGAAGTGATT TTCGAAGAAT TCAAGGGCAC CGGCAACATG
GAGATCGTGC TCGACCGCAA GCTGGCCGAC CGCCGCATCT TCCCGGCCAT CGACATCAAC
AAGTCCGGGA CCCGCAAGGA AGAGCTCCTG TTGCCTTCCG ACGACCTGAA CCGAATCTGG
ATCCTGCGCA AGCTCCTGTC CCCCCTGAAC CCTATCGACG CCATGGAGTT TCTGCTGGAC
AAGATGCAGG GGACCAAGAA CAACGCGGAT TTTCTGGCTT CAATGAACCG CTGA
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| Protein sequence | MMNDVSTPDT HQKDQDARDR NEMNLVELKS KNIRELMTIA KALNIEGASS MRKQELIFAL
LQAQAEMSGL IYGEGVLEIL PDGFGFLRSQ NYNYLPGPDD IYVSPSQIRR FNLRTGDSVS
GQIRPPKDNE RYFALLKVEA VNYEDPDVAR DKILFDNLTP LYPDRRVRLE SIADNLSTRV
MDLLTPIGFG QRGLIVAQPR TGKTMLLQNI ANAVTVNHKE AYLIVLLIDE RPEEVTDMQR
NVRAEVVSST FDEPPQRHVQ VAEMVSEKAK RLVEHKRDVV ILLDSITRLA RAYNSVVPPS
GKILSGGLDS NALHRPKRFF GAARNVEQGG SLTIIATALI DTGSRMDEVI FEEFKGTGNM
EIVLDRKLAD RRIFPAIDIN KSGTRKEELL LPSDDLNRIW ILRKLLSPLN PIDAMEFLLD
KMQGTKNNAD FLASMNR
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