| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1701 |
|---|
| Symbol | |
|---|
| ID | 4459988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 2081494 |
|---|
| End bp | 2081871 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639702470 |
|---|
| Product | ModE family transcriptional regulator |
|---|
| Protein accession | YP_845823 |
|---|
| Protein GI | 116749136 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2005] N-terminal domain of molybdenum-binding protein |
|---|
| TIGRFAM ID | [TIGR00637] ModE molybdate transport repressor domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.540153 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.344174 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAGCA CCTTGGCGAA GAAGAGTCCG GGAAGATTGA CCATTCGCTC CAAGATATGG
ATCGCGGATG AAGACGGCGG AGTTGTCTTT GGGGCCGGCC GCCTGCGCAT TTTGAGGGCG
GTCGAGGAGC AGGGTTCCAT ACACCTGGCG GCCAAGACGC TCAACATGAG TTACCGGGCG
GTCTGGGGAA AGATCAAAGC GACGGAGGAT CGGCTTGGCA GGCCCCTGCT GACGCGAAAG
GTGGGAGGAA CCAAGGGGGG CGGCTCTGAG CTCACCCCCC TTGGAAAGGC TCTCGTGGAA
CGGTTTCGGC ATCTTCAGAC GTTGACCGAA ACAGCGGCTG ATACCCTCTT TCAGGACCTC
TTCATCGACG GATTATGA
|
|---|
| Protein sequence | MESTLAKKSP GRLTIRSKIW IADEDGGVVF GAGRLRILRA VEEQGSIHLA AKTLNMSYRA
VWGKIKATED RLGRPLLTRK VGGTKGGGSE LTPLGKALVE RFRHLQTLTE TAADTLFQDL
FIDGL
|
|---|
| |